Variant report
| Variant | rs11974593 |
|---|---|
| Chromosome Location | chr7:98991197-98991198 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:98979400-99001800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 2 | chr7:98980400-99003800 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 3 | chr7:98980800-99000600 | Strong transcription | Dnd41 | blood |
| 4 | chr7:98981000-98993000 | Strong transcription | A549 | lung |
| 5 | chr7:98985600-99003800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 6 | chr7:98986200-98992000 | Weak transcription | HSMMtube | muscle |
| 7 | chr7:98987000-99004200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr7:98989600-98991400 | Active TSS | HUES48 Cell Line | embryonic stem cell |
| 9 | chr7:98989600-98991400 | Active TSS | iPS-18 Cell Line | embryonic stem cell |
| 10 | chr7:98989600-98991600 | Genic enhancers | HMEC | breast |
| 11 | chr7:98989800-98991200 | Active TSS | H1 Cell Line | embryonic stem cell |
| 12 | chr7:98989800-98991200 | Active TSS | H9 Cell Line | embryonic stem cell |
| 13 | chr7:98989800-98991200 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 14 | chr7:98989800-98991200 | Active TSS | HUES64 Cell Line | embryonic stem cell |
| 15 | chr7:98989800-98991200 | Active TSS | iPS-15b Cell Line | embryonic stem cell |
| 16 | chr7:98989800-98991200 | Active TSS | Brain Cingulate Gyrus | brain |
| 17 | chr7:98989800-98991200 | Weak transcription | HepG2 | liver |
| 18 | chr7:98989800-98991400 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 19 | chr7:98989800-98991400 | Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 20 | chr7:98989800-98991600 | Genic enhancers | Primary B cells from cord blood | blood |
| 21 | chr7:98989800-98991600 | Flanking Active TSS | Skeletal Muscle Female | skeletal muscle |
| 22 | chr7:98989800-98991600 | Flanking Active TSS | Stomach Smooth Muscle | stomach |
| 23 | chr7:98989800-98992000 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 24 | chr7:98990000-98991200 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 25 | chr7:98990000-98991200 | Flanking Active TSS | Primary T helper cells fromperipheralblood | blood |
| 26 | chr7:98990000-98991200 | Transcr. at gene 5' and 3' | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 27 | chr7:98990000-98991200 | Active TSS | Brain Germinal Matrix | brain |
| 28 | chr7:98990000-98991200 | Active TSS | Rectal Smooth Muscle | rectum |
| 29 | chr7:98990000-98991400 | Active TSS | iPS DF 6.9 Cell Line | embryonic stem cell |
| 30 | chr7:98990000-98991400 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 31 | chr7:98990000-98991400 | Transcr. at gene 5' and 3' | Fetal Intestine Small | intestine |
| 32 | chr7:98990000-98991400 | Flanking Active TSS | Right Ventricle | heart |
| 33 | chr7:98990000-98991600 | Transcr. at gene 5' and 3' | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 34 | chr7:98990000-98991600 | Flanking Active TSS | Colonic Mucosa | Colon |
| 35 | chr7:98990000-98991600 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 36 | chr7:98990000-98991600 | Genic enhancers | NHLF | lung |
| 37 | chr7:98990000-98992000 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 38 | chr7:98990000-99002800 | Strong transcription | GM12878-XiMat | blood |
| 39 | chr7:98990200-98991200 | Active TSS | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 40 | chr7:98990200-98991200 | Flanking Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 41 | chr7:98990200-98991200 | Active TSS | HUES6 Cell Line | embryonic stem cell |
| 42 | chr7:98990200-98991200 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 43 | chr7:98990200-98991200 | Transcr. at gene 5' and 3' | Primary B cells from peripheral blood | blood |
| 44 | chr7:98990200-98991200 | Transcr. at gene 5' and 3' | Primary T helper cells PMA-I stimulated | -- |
| 45 | chr7:98990200-98991200 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 46 | chr7:98990200-98991200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 47 | chr7:98990200-98991200 | Transcr. at gene 5' and 3' | Primary mononuclear cells fromperipheralblood | Blood |
| 48 | chr7:98990200-98991200 | Active TSS | Brain Angular Gyrus | brain |
| 49 | chr7:98990200-98991200 | Active TSS | Colon Smooth Muscle | Colon |
| 50 | chr7:98990200-98991200 | Active TSS | Fetal Intestine Large | intestine |
