The 2.0 version of rSNPBase

Variant report

Variant rs7778859
Chromosome Location chr7:99003071-99003072
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:98980400-99003800 Strong transcription Primary hematopoietic stem cells short term culture blood
2 chr7:98985600-99003800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr7:98987000-99004200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr7:98991400-99004200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr7:98991600-99003400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr7:98991600-99003400 Weak transcription Stomach Mucosa stomach
7 chr7:98991600-99003400 Strong transcription K562 blood
8 chr7:98991600-99005200 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr7:98991800-99003400 Strong transcription Duodenum Mucosa Duodenum
10 chr7:98991800-99003400 Strong transcription Fetal Intestine Small intestine
11 chr7:98991800-99003600 Strong transcription HUES48 Cell Line embryonic stem cell
12 chr7:98991800-99003600 Strong transcription HUES6 Cell Line embryonic stem cell
13 chr7:98991800-99003600 Strong transcription iPS-20b Cell Line embryonic stem cell
14 chr7:98991800-99003800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr7:98992000-99003200 Strong transcription Cortex derived primary cultured neurospheres brain
16 chr7:98992000-99003400 Strong transcription Fetal Muscle Leg muscle
17 chr7:98992000-99003400 Strong transcription Fetal Thymus thymus
18 chr7:98992000-99004000 Strong transcription Fetal Stomach stomach
19 chr7:98992200-99003800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr7:98992400-99004000 Strong transcription Hela-S3 cervix
21 chr7:98995400-99003400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr7:98997400-99003200 Strong transcription Fetal Adrenal Gland Adrenal Gland
23 chr7:98997600-99003400 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr7:98998600-99003400 Weak transcription Small Intestine intestine
25 chr7:98998600-99004200 Weak transcription Psoas Muscle Psoas
26 chr7:98999000-99004000 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr7:98999000-99004200 Weak transcription Fetal Heart heart
28 chr7:99000400-99003400 Strong transcription iPS-15b Cell Line embryonic stem cell
29 chr7:99000600-99004200 Genic enhancers Dnd41 blood
30 chr7:99001000-99004600 Weak transcription Fetal Kidney kidney
31 chr7:99001000-99005200 Weak transcription Fetal Brain Male brain
32 chr7:99001200-99003600 Genic enhancers Skeletal Muscle Female skeletal muscle
33 chr7:99001400-99003400 Genic enhancers Stomach Smooth Muscle stomach
34 chr7:99001400-99003600 Genic enhancers Brain Inferior Temporal Lobe brain
35 chr7:99001400-99004000 Weak transcription HSMMtube muscle
36 chr7:99001600-99003400 Genic enhancers Osteobl bone
37 chr7:99001600-99004200 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr7:99001800-99004600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr7:99002000-99003400 Genic enhancers Breast Myoepithelial Primary Cells Breast
40 chr7:99002000-99003600 Enhancers HMEC breast
41 chr7:99002000-99004400 Enhancers Primary T killer naive cells fromperipheralblood blood
42 chr7:99002000-99004400 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr7:99002200-99003400 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr7:99002200-99003400 Strong transcription Brain Germinal Matrix brain
45 chr7:99002200-99003800 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr7:99002200-99004200 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr7:99002400-99003200 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr7:99002400-99003200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
49 chr7:99002400-99003400 Strong transcription Fetal Brain Female brain
50 chr7:99002400-99003400 Enhancers Right Atrium heart

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Last update: Aug 31, 2015