Variant report

Variant	rs7072072
Chromosome Location	chr10:62078323-62078324
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs12769045	0.80[EUR][1000 genomes]
rs12769571	0.86[CEU][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12771158	0.84[CEU][hapmap];1.00[CHD][hapmap];0.94[TSI][hapmap];0.84[YRI][hapmap];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12782331	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17233781	0.82[EUR][1000 genomes]
rs17233871	0.82[EUR][1000 genomes]
rs34397303	0.81[EUR][1000 genomes]
rs34517433	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35204557	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35412732	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35545571	0.90[EUR][1000 genomes]
rs35590836	0.84[EUR][1000 genomes]
rs35628300	0.90[EUR][1000 genomes]
rs36080943	0.89[EUR][1000 genomes]
rs7090125	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71495636	0.90[EUR][1000 genomes]
rs7896287	0.82[GIH][hapmap]
rs7899737	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs898330	0.81[CEU][hapmap]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62065000-62081400	Weak transcription	Right Atrium	heart
2	chr10:62074400-62082800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr10:62074600-62083600	Weak transcription	Psoas Muscle	Psoas
4	chr10:62076000-62079600	Weak transcription	Brain Hippocampus Middle	brain
5	chr10:62076000-62082600	Weak transcription	Brain Angular Gyrus	brain
6	chr10:62076000-62082800	Weak transcription	Fetal Brain Female	brain
7	chr10:62076200-62080000	Weak transcription	Brain Cingulate Gyrus	brain
8	chr10:62076200-62083600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr10:62078200-62078400	Enhancers	Brain Substantia Nigra	brain
10	chr10:62078200-62078400	Enhancers	Fetal Kidney	kidney
11	chr10:62078200-62079000	Enhancers	Brain Inferior Temporal Lobe	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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