Variant report

Variant	rs12782331
Chromosome Location	chr10:62077346-62077347
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:62071874..62074830-chr10:62076908..62078764,2	K562	blood:
2	chr10:62075178..62079245-chr10:62086191..62089136,4	K562	blood:
3	chr10:62076046..62077883-chr10:62077931..62079448,2	K562	blood:
4	chr10:62076298..62080547-chr10:62086191..62089136,4	K562	blood:
5	chr10:62073096..62074950-chr10:62076834..62078394,3	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs12769045	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12769571	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12771158	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551683	1.00[ASN][1000 genomes]
rs1551684	0.83[ASN][1000 genomes]
rs17233781	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17233871	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34397303	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34517433	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35204557	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35412732	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35545571	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35590836	0.94[EUR][1000 genomes]
rs35628300	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36080943	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7072072	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7082025	1.00[ASN][1000 genomes]
rs7090125	0.90[EUR][1000 genomes]
rs7100330	1.00[ASN][1000 genomes]
rs71495636	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806129	1.00[ASN][1000 genomes]
rs72806131	1.00[ASN][1000 genomes]
rs72806132	1.00[ASN][1000 genomes]
rs72806133	1.00[ASN][1000 genomes]
rs72806134	1.00[ASN][1000 genomes]
rs72806135	1.00[ASN][1000 genomes]
rs72806140	1.00[ASN][1000 genomes]
rs72806146	1.00[ASN][1000 genomes]
rs72806149	1.00[ASN][1000 genomes]
rs72806151	1.00[ASN][1000 genomes]
rs72806156	1.00[ASN][1000 genomes]
rs72806158	1.00[ASN][1000 genomes]
rs72806159	1.00[ASN][1000 genomes]
rs72806162	1.00[ASN][1000 genomes]
rs7896287	1.00[ASN][1000 genomes]
rs7899737	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7907761	1.00[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62065000-62081400	Weak transcription	Right Atrium	heart
2	chr10:62065800-62078200	Weak transcription	Brain Substantia Nigra	brain
3	chr10:62074400-62078000	Weak transcription	Fetal Kidney	kidney
4	chr10:62074400-62082800	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr10:62074600-62083600	Weak transcription	Psoas Muscle	Psoas
6	chr10:62076000-62078200	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr10:62076000-62079600	Weak transcription	Brain Hippocampus Middle	brain
8	chr10:62076000-62082600	Weak transcription	Brain Angular Gyrus	brain
9	chr10:62076000-62082800	Weak transcription	Fetal Brain Female	brain
10	chr10:62076200-62080000	Weak transcription	Brain Cingulate Gyrus	brain
11	chr10:62076200-62083600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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