Variant report

Variant	rs35545571
Chromosome Location	chr10:62065288-62065289
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:61842103..61843866-chr10:62065203..62067692,2	K562	blood:
2	chr10:62057640..62059903-chr10:62063838..62066618,2	K562	blood:

Variant related genes	Relation type
ENSG00000151150	Chromatin interaction

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs12769045	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12769571	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12771158	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12781443	0.81[AMR][1000 genomes]
rs12782331	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551683	1.00[ASN][1000 genomes]
rs1551684	0.83[ASN][1000 genomes]
rs17233781	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17233871	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34397303	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34517433	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35175163	0.81[AMR][1000 genomes]
rs35204557	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35305500	0.81[AMR][1000 genomes]
rs35412732	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35590836	0.94[EUR][1000 genomes]
rs35628300	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36080943	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6479707	0.81[AMR][1000 genomes]
rs7072072	0.90[EUR][1000 genomes]
rs7082025	1.00[ASN][1000 genomes]
rs7090125	0.90[EUR][1000 genomes]
rs7090893	0.81[AMR][1000 genomes]
rs7100330	1.00[ASN][1000 genomes]
rs71495632	0.81[AMR][1000 genomes]
rs71495635	0.84[AMR][1000 genomes]
rs71495636	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806129	1.00[ASN][1000 genomes]
rs72806131	1.00[ASN][1000 genomes]
rs72806132	1.00[ASN][1000 genomes]
rs72806133	1.00[ASN][1000 genomes]
rs72806134	1.00[ASN][1000 genomes]
rs72806135	1.00[ASN][1000 genomes]
rs72806140	1.00[ASN][1000 genomes]
rs72806146	1.00[ASN][1000 genomes]
rs72806149	1.00[ASN][1000 genomes]
rs72806151	1.00[ASN][1000 genomes]
rs72806156	1.00[ASN][1000 genomes]
rs72806158	1.00[ASN][1000 genomes]
rs72806159	1.00[ASN][1000 genomes]
rs72806162	1.00[ASN][1000 genomes]
rs7896287	1.00[ASN][1000 genomes]
rs7899737	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7900123	0.81[AMR][1000 genomes]
rs7907761	1.00[ASN][1000 genomes]

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62060600-62067600	Weak transcription	Brain Anterior Caudate	brain
2	chr10:62060800-62066800	Weak transcription	Brain Angular Gyrus	brain
3	chr10:62060800-62073400	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr10:62064400-62065800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr10:62064400-62066000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr10:62064400-62066000	Enhancers	HUVEC	blood vessel
7	chr10:62064600-62065800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr10:62064600-62065800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr10:62064600-62065800	Flanking Active TSS	K562	blood
10	chr10:62064600-62065800	Enhancers	NH-A	brain
11	chr10:62064600-62065800	Enhancers	NHLF	lung
12	chr10:62064600-62065800	Enhancers	Osteobl	bone
13	chr10:62064600-62066000	Enhancers	NHDF-Ad	bronchial
14	chr10:62064800-62065400	Enhancers	Fetal Heart	heart
15	chr10:62065000-62065400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr10:62065000-62065400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr10:62065000-62065400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr10:62065000-62065400	Enhancers	Brain Cingulate Gyrus	brain
19	chr10:62065000-62065400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
20	chr10:62065000-62065600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr10:62065000-62065800	Enhancers	Sigmoid Colon	Sigmoid Colon
22	chr10:62065000-62081400	Weak transcription	Right Atrium	heart
23	chr10:62065200-62065400	Enhancers	Muscle Satellite Cultured Cells	--
24	chr10:62065200-62065600	Weak transcription	Brain Substantia Nigra	brain
25	chr10:62065200-62066000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr10:62065200-62067400	Weak transcription	Brain Hippocampus Middle	brain
27	chr10:62065200-62070600	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr10:62065200-62072600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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