Variant report

Variant	rs72806149
Chromosome Location	chr10:62160606-62160607
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:62151901..62154591-chr10:62158210..62160811,2	K562	blood:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs12769571	1.00[ASN][1000 genomes]
rs12771158	1.00[ASN][1000 genomes]
rs12782331	1.00[ASN][1000 genomes]
rs1551683	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551684	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34517433	1.00[ASN][1000 genomes]
rs35204557	1.00[ASN][1000 genomes]
rs35412732	1.00[ASN][1000 genomes]
rs35545571	1.00[ASN][1000 genomes]
rs35628300	1.00[ASN][1000 genomes]
rs36080943	1.00[ASN][1000 genomes]
rs4072839	0.82[EUR][1000 genomes]
rs57679969	0.82[EUR][1000 genomes]
rs7082025	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7099869	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7100330	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71495636	1.00[ASN][1000 genomes]
rs72806126	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806129	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806131	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806132	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806133	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806134	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806135	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806140	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806146	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806151	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806156	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806158	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806159	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806162	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7896287	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7899737	1.00[ASN][1000 genomes]
rs7907761	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62155400-62165000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
2	chr10:62157600-62170600	Weak transcription	NH-A	brain
3	chr10:62159400-62162400	Weak transcription	Psoas Muscle	Psoas
4	chr10:62159400-62172600	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr10:62159600-62187600	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr10:62159800-62173600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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