Variant report

Variant	rs7099869
Chromosome Location	chr10:62170256-62170257
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:62101806..62104190-chr10:62167973..62170320,2	K562	blood:
2	chr10:62168115..62170337-chr10:62171205..62172875,2	K562	blood:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs12769571	1.00[CHB][hapmap]
rs12771158	1.00[CHB][hapmap]
rs1551683	0.84[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];0.90[MEX][hapmap];0.94[TSI][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1551684	0.84[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];0.91[MEX][hapmap];0.94[TSI][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17233781	1.00[CHB][hapmap]
rs17233871	1.00[CHB][hapmap]
rs4072839	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57679969	0.93[EUR][1000 genomes]
rs7082025	0.92[CEU][hapmap];1.00[CHB][hapmap];0.88[EUR][1000 genomes]
rs7100330	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806129	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806131	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72806132	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806133	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806134	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806135	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806140	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806146	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806149	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806151	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806156	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806158	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806159	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806162	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7896287	0.84[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];0.91[MEX][hapmap];0.94[TSI][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7907761	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62157600-62170600	Weak transcription	NH-A	brain
2	chr10:62159400-62172600	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr10:62159600-62187600	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr10:62159800-62173600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr10:62168000-62171400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr10:62168600-62170800	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr10:62168800-62180000	Weak transcription	Brain Hippocampus Middle	brain
8	chr10:62169000-62177800	Weak transcription	Brain Anterior Caudate	brain

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