Variant report

Variant	rs7907761
Chromosome Location	chr10:62156169-62156170
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:62150785..62152810-chr10:62155136..62156755,2	K562	blood:
2	chr10:62141555..62143240-chr10:62154160..62157030,2	MCF-7	breast:
3	chr10:62146342..62148411-chr10:62155155..62157174,2	K562	blood:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs12769571	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12771158	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12782331	1.00[ASN][1000 genomes]
rs1551683	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551684	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17233781	1.00[CHB][hapmap]
rs17233871	1.00[CHB][hapmap]
rs34517433	1.00[ASN][1000 genomes]
rs35204557	1.00[ASN][1000 genomes]
rs35412732	1.00[ASN][1000 genomes]
rs35545571	1.00[ASN][1000 genomes]
rs35628300	1.00[ASN][1000 genomes]
rs36080943	1.00[ASN][1000 genomes]
rs4072839	0.82[EUR][1000 genomes]
rs57679969	0.82[EUR][1000 genomes]
rs7082025	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7090182	1.00[YRI][hapmap]
rs7090898	0.88[YRI][hapmap]
rs7099869	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7100330	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71495636	1.00[ASN][1000 genomes]
rs72806126	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806129	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806131	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806132	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806133	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806134	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806135	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806140	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806146	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806149	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806151	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806156	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806158	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806159	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806162	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7896287	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7899737	1.00[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62145000-62159000	Weak transcription	Ovary	ovary
2	chr10:62146000-62156800	Weak transcription	A549	lung
3	chr10:62146000-62157200	Weak transcription	Gastric	stomach
4	chr10:62146000-62159000	Weak transcription	Psoas Muscle	Psoas
5	chr10:62149600-62157000	Weak transcription	Primary T helper cells PMA-I stimulated	--
6	chr10:62149600-62157600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr10:62152600-62158600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr10:62153600-62156200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
9	chr10:62154600-62157000	Weak transcription	Brain Angular Gyrus	brain
10	chr10:62154600-62158400	Weak transcription	Brain Inferior Temporal Lobe	brain
11	chr10:62154600-62159000	Weak transcription	Brain Cingulate Gyrus	brain
12	chr10:62154600-62159000	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr10:62155400-62165000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
14	chr10:62155800-62156600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr10:62155800-62159000	Weak transcription	Brain Substantia Nigra	brain
16	chr10:62156000-62156200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr10:62156000-62158400	Weak transcription	Brain Anterior Caudate	brain

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