Variant report

Variant	rs72806134
Chromosome Location	chr10:62150926-62150927
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:62070583..62073362-chr10:62149551..62151844,2	K562	blood:
2	chr10:62150785..62152810-chr10:62155136..62156755,2	K562	blood:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs12769571	1.00[ASN][1000 genomes]
rs12771158	1.00[ASN][1000 genomes]
rs12782331	1.00[ASN][1000 genomes]
rs1551683	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551684	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34517433	1.00[ASN][1000 genomes]
rs35204557	1.00[ASN][1000 genomes]
rs35412732	1.00[ASN][1000 genomes]
rs35545571	1.00[ASN][1000 genomes]
rs35628300	1.00[ASN][1000 genomes]
rs36080943	1.00[ASN][1000 genomes]
rs4072839	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs57679969	0.82[EUR][1000 genomes]
rs7082025	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7099869	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7100330	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71495636	1.00[ASN][1000 genomes]
rs72806126	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806129	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806131	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806132	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806133	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806135	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806140	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806146	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806149	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806151	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806156	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806158	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806159	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806162	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7896287	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7899737	1.00[ASN][1000 genomes]
rs7907761	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:38 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62145000-62154400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr10:62145000-62159000	Weak transcription	Ovary	ovary
3	chr10:62145600-62154200	Weak transcription	HSMM	muscle
4	chr10:62146000-62154200	Weak transcription	Esophagus	oesophagus
5	chr10:62146000-62154200	Weak transcription	Right Atrium	heart
6	chr10:62146000-62156800	Weak transcription	A549	lung
7	chr10:62146000-62157200	Weak transcription	Gastric	stomach
8	chr10:62146000-62159000	Weak transcription	Psoas Muscle	Psoas
9	chr10:62147200-62151200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr10:62147400-62151000	Enhancers	HUVEC	blood vessel
11	chr10:62148600-62151000	Enhancers	H1 Cell Line	embryonic stem cell
12	chr10:62148600-62154200	Weak transcription	NHDF-Ad	bronchial
13	chr10:62148800-62154200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr10:62149000-62151200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr10:62149000-62154200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
16	chr10:62149000-62154200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
17	chr10:62149000-62154200	Weak transcription	Spleen	Spleen
18	chr10:62149200-62154000	Weak transcription	Primary T cells from cord blood	blood
19	chr10:62149400-62151000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr10:62149600-62154200	Weak transcription	Primary B cells from peripheral blood	blood
21	chr10:62149600-62157000	Weak transcription	Primary T helper cells PMA-I stimulated	--
22	chr10:62149600-62157600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
23	chr10:62149800-62151800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr10:62149800-62154200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
25	chr10:62150200-62151000	Enhancers	Fetal Brain Female	brain
26	chr10:62150400-62151000	Enhancers	Brain Anterior Caudate	brain
27	chr10:62150400-62151000	Enhancers	Brain Cingulate Gyrus	brain
28	chr10:62150400-62151000	Enhancers	Brain Inferior Temporal Lobe	brain
29	chr10:62150400-62151200	Enhancers	Brain Hippocampus Middle	brain
30	chr10:62150400-62152000	Weak transcription	HUES6 Cell Line	embryonic stem cell
31	chr10:62150400-62154200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
32	chr10:62150400-62154200	Weak transcription	Muscle Satellite Cultured Cells	--
33	chr10:62150600-62151000	Enhancers	Pancreatic Islets	Pancreatic Islet
34	chr10:62150600-62151600	Enhancers	Brain Substantia Nigra	brain
35	chr10:62150800-62151000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
36	chr10:62150800-62151000	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
37	chr10:62150800-62153400	Weak transcription	Brain Angular Gyrus	brain
38	chr10:62150800-62154200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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