Variant report

Variant	rs7082025
Chromosome Location	chr10:62152022-62152023
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:62150785..62152810-chr10:62155136..62156755,2	K562	blood:
2	chr10:62151901..62154591-chr10:62158210..62160811,2	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs12769571	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12771158	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12782331	1.00[ASN][1000 genomes]
rs1551683	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551684	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17233781	1.00[CHB][hapmap]
rs17233871	1.00[CHB][hapmap]
rs34517433	1.00[ASN][1000 genomes]
rs35204557	1.00[ASN][1000 genomes]
rs35412732	1.00[ASN][1000 genomes]
rs35545571	1.00[ASN][1000 genomes]
rs35628300	1.00[ASN][1000 genomes]
rs36080943	1.00[ASN][1000 genomes]
rs4072839	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs57679969	0.82[EUR][1000 genomes]
rs7099869	0.88[EUR][1000 genomes]
rs7100330	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71495636	1.00[ASN][1000 genomes]
rs72806126	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806129	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806131	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806132	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806133	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806134	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806135	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806140	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806146	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806149	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806151	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806156	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806158	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806159	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806162	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7896287	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7899737	1.00[ASN][1000 genomes]
rs7907761	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62145000-62154400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr10:62145000-62159000	Weak transcription	Ovary	ovary
3	chr10:62145600-62154200	Weak transcription	HSMM	muscle
4	chr10:62146000-62154200	Weak transcription	Esophagus	oesophagus
5	chr10:62146000-62154200	Weak transcription	Right Atrium	heart
6	chr10:62146000-62156800	Weak transcription	A549	lung
7	chr10:62146000-62157200	Weak transcription	Gastric	stomach
8	chr10:62146000-62159000	Weak transcription	Psoas Muscle	Psoas
9	chr10:62148600-62154200	Weak transcription	NHDF-Ad	bronchial
10	chr10:62148800-62154200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr10:62149000-62154200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
12	chr10:62149000-62154200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr10:62149000-62154200	Weak transcription	Spleen	Spleen
14	chr10:62149200-62154000	Weak transcription	Primary T cells from cord blood	blood
15	chr10:62149600-62154200	Weak transcription	Primary B cells from peripheral blood	blood
16	chr10:62149600-62157000	Weak transcription	Primary T helper cells PMA-I stimulated	--
17	chr10:62149600-62157600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
18	chr10:62149800-62154200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
19	chr10:62150400-62154200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
20	chr10:62150400-62154200	Weak transcription	Muscle Satellite Cultured Cells	--
21	chr10:62150800-62153400	Weak transcription	Brain Angular Gyrus	brain
22	chr10:62150800-62154200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr10:62151000-62153400	Weak transcription	Brain Anterior Caudate	brain
24	chr10:62151000-62153400	Weak transcription	Brain Inferior Temporal Lobe	brain
25	chr10:62151000-62153800	Weak transcription	Brain Cingulate Gyrus	brain
26	chr10:62151200-62153600	Weak transcription	Brain Hippocampus Middle	brain
27	chr10:62151200-62155400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
28	chr10:62151600-62153400	Weak transcription	Brain Substantia Nigra	brain
29	chr10:62151800-62152200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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