Variant report

Variant	rs72806132
Chromosome Location	chr10:62145736-62145737
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:62140651..62142796-chr10:62144164..62146237,2	K562	blood:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs12769571	1.00[ASN][1000 genomes]
rs12771158	1.00[ASN][1000 genomes]
rs12782331	1.00[ASN][1000 genomes]
rs1551683	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551684	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34517433	1.00[ASN][1000 genomes]
rs35204557	1.00[ASN][1000 genomes]
rs35412732	1.00[ASN][1000 genomes]
rs35545571	1.00[ASN][1000 genomes]
rs35628300	1.00[ASN][1000 genomes]
rs36080943	1.00[ASN][1000 genomes]
rs4072839	0.82[EUR][1000 genomes]
rs57679969	0.82[EUR][1000 genomes]
rs7082025	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7099869	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7100330	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71495636	1.00[ASN][1000 genomes]
rs72806126	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806129	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806131	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806133	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806134	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806135	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806140	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806146	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806149	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806151	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806156	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806158	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806159	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806162	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7896287	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7899737	1.00[ASN][1000 genomes]
rs7907761	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:45 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62142800-62145800	Enhancers	HUVEC	blood vessel
2	chr10:62142800-62145800	Enhancers	NHEK	skin
3	chr10:62142800-62146000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr10:62142800-62146000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr10:62142800-62146000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
6	chr10:62143000-62146000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr10:62143000-62146000	Enhancers	HMEC	breast
8	chr10:62143000-62146000	Enhancers	NHDF-Ad	bronchial
9	chr10:62143000-62146600	Enhancers	Brain Substantia Nigra	brain
10	chr10:62144200-62145800	Flanking Active TSS	Brain Hippocampus Middle	brain
11	chr10:62144200-62146200	Enhancers	Brain Anterior Caudate	brain
12	chr10:62144400-62146000	Enhancers	Fetal Brain Female	brain
13	chr10:62144400-62146400	Enhancers	Fetal Heart	heart
14	chr10:62144600-62146000	Enhancers	Left Ventricle	heart
15	chr10:62144600-62146000	Enhancers	Right Atrium	heart
16	chr10:62144600-62146000	Enhancers	Skeletal Muscle Female	skeletal muscle
17	chr10:62144800-62146000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr10:62144800-62146000	Enhancers	Psoas Muscle	Psoas
19	chr10:62145000-62145800	Weak transcription	Esophagus	oesophagus
20	chr10:62145000-62148800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr10:62145000-62148800	Weak transcription	Fetal Muscle Leg	muscle
22	chr10:62145000-62148800	Weak transcription	Pancreas	Pancrea
23	chr10:62145000-62148800	Weak transcription	Spleen	Spleen
24	chr10:62145000-62154400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr10:62145000-62159000	Weak transcription	Ovary	ovary
26	chr10:62145200-62145800	Enhancers	Muscle Satellite Cultured Cells	--
27	chr10:62145200-62146000	Enhancers	Stomach Mucosa	stomach
28	chr10:62145200-62148600	Weak transcription	H9 Cell Line	embryonic stem cell
29	chr10:62145200-62148800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr10:62145200-62148800	Weak transcription	Cortex derived primary cultured neurospheres	brain
31	chr10:62145200-62149200	Weak transcription	Aorta	Aorta
32	chr10:62145400-62145800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr10:62145400-62145800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr10:62145400-62145800	Weak transcription	Fetal Brain Male	brain
35	chr10:62145400-62146000	Enhancers	A549	lung
36	chr10:62145400-62148600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr10:62145400-62150000	Weak transcription	Osteobl	bone
38	chr10:62145400-62150400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
39	chr10:62145600-62146000	Flanking Active TSS	Brain Cingulate Gyrus	brain
40	chr10:62145600-62146000	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
41	chr10:62145600-62146200	Flanking Active TSS	Brain Angular Gyrus	brain
42	chr10:62145600-62148400	Weak transcription	NH-A	brain
43	chr10:62145600-62150000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr10:62145600-62150000	Weak transcription	NHLF	lung
45	chr10:62145600-62154200	Weak transcription	HSMM	muscle

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