Variant report

Variant	rs71495636
Chromosome Location	chr10:62072491-62072492
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:62071874..62074830-chr10:62076908..62078764,2	K562	blood:
2	chr10:62070583..62073362-chr10:62149551..62151844,2	K562	blood:
3	chr10:62054563..62061814-chr10:62071437..62076151,9	K562	blood:
4	chr10:62069974..62073372-chr10:62104363..62107755,3	K562	blood:
5	chr10:62069974..62072898-chr10:62104363..62107324,2	K562	blood:

Variant related genes	Relation type
ENSG00000151150	Chromatin interaction

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs12769045	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12769571	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12771158	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12781443	0.81[AMR][1000 genomes]
rs12782331	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551683	1.00[ASN][1000 genomes]
rs1551684	0.83[ASN][1000 genomes]
rs17233781	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17233871	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34397303	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34517433	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35175163	0.81[AMR][1000 genomes]
rs35204557	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35305500	0.81[AMR][1000 genomes]
rs35412732	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35545571	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35590836	0.94[EUR][1000 genomes]
rs35628300	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36080943	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6479707	0.81[AMR][1000 genomes]
rs7072072	0.90[EUR][1000 genomes]
rs7082025	1.00[ASN][1000 genomes]
rs7090125	0.90[EUR][1000 genomes]
rs7090893	0.81[AMR][1000 genomes]
rs7100330	1.00[ASN][1000 genomes]
rs71495632	0.81[AMR][1000 genomes]
rs71495635	0.84[AMR][1000 genomes]
rs72806129	1.00[ASN][1000 genomes]
rs72806131	1.00[ASN][1000 genomes]
rs72806132	1.00[ASN][1000 genomes]
rs72806133	1.00[ASN][1000 genomes]
rs72806134	1.00[ASN][1000 genomes]
rs72806135	1.00[ASN][1000 genomes]
rs72806140	1.00[ASN][1000 genomes]
rs72806146	1.00[ASN][1000 genomes]
rs72806149	1.00[ASN][1000 genomes]
rs72806151	1.00[ASN][1000 genomes]
rs72806156	1.00[ASN][1000 genomes]
rs72806158	1.00[ASN][1000 genomes]
rs72806159	1.00[ASN][1000 genomes]
rs72806162	1.00[ASN][1000 genomes]
rs7896287	1.00[ASN][1000 genomes]
rs7899737	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7900123	0.81[AMR][1000 genomes]
rs7907761	1.00[ASN][1000 genomes]

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62060800-62073400	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr10:62065000-62081400	Weak transcription	Right Atrium	heart
3	chr10:62065200-62072600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr10:62065800-62072600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr10:62065800-62073200	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr10:62065800-62078200	Weak transcription	Brain Substantia Nigra	brain
7	chr10:62066800-62077000	Weak transcription	Pancreas	Pancrea
8	chr10:62068800-62073800	Weak transcription	Brain Hippocampus Middle	brain
9	chr10:62069400-62072800	Weak transcription	Brain Anterior Caudate	brain
10	chr10:62070600-62072600	Enhancers	K562	blood
11	chr10:62070800-62075800	Weak transcription	Left Ventricle	heart
12	chr10:62071000-62072600	Weak transcription	Brain Inferior Temporal Lobe	brain
13	chr10:62071000-62074200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr10:62071000-62074200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr10:62071200-62074400	Weak transcription	Psoas Muscle	Psoas
16	chr10:62071600-62074200	Weak transcription	Fetal Kidney	kidney
17	chr10:62071800-62072800	Enhancers	HUVEC	blood vessel
18	chr10:62072000-62072600	Enhancers	Hela-S3	cervix
19	chr10:62072000-62072800	Enhancers	NHDF-Ad	bronchial
20	chr10:62072000-62074800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr10:62072000-62074800	Enhancers	HMEC	breast
22	chr10:62072000-62075000	Enhancers	NH-A	brain
23	chr10:62072000-62075400	Enhancers	NHLF	lung
24	chr10:62072000-62075800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr10:62072200-62072600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr10:62072200-62073200	Enhancers	Brain Angular Gyrus	brain
27	chr10:62072200-62074600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr10:62072200-62075000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr10:62072200-62075000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
30	chr10:62072200-62075200	Enhancers	NHEK	skin
31	chr10:62072400-62075000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr10:62072400-62075400	Enhancers	Muscle Satellite Cultured Cells	--
33	chr10:62072400-62075400	Enhancers	Osteobl	bone

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