Variant report

Variant	rs35628300
Chromosome Location	chr10:62062235-62062236
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:62061935..62063886-chr10:62065509..62067074,2	K562	blood:

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs12769045	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12769571	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12771158	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12781443	0.81[AMR][1000 genomes]
rs12782331	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551683	1.00[ASN][1000 genomes]
rs1551684	0.83[ASN][1000 genomes]
rs17233781	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17233871	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34397303	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34517433	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35175163	0.81[AMR][1000 genomes]
rs35204557	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35305500	0.81[AMR][1000 genomes]
rs35412732	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35545571	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35590836	0.94[EUR][1000 genomes]
rs36080943	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6479707	0.81[AMR][1000 genomes]
rs7072072	0.90[EUR][1000 genomes]
rs7082025	1.00[ASN][1000 genomes]
rs7090125	0.90[EUR][1000 genomes]
rs7090893	0.81[AMR][1000 genomes]
rs7100330	1.00[ASN][1000 genomes]
rs71495632	0.81[AMR][1000 genomes]
rs71495635	0.84[AMR][1000 genomes]
rs71495636	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806129	1.00[ASN][1000 genomes]
rs72806131	1.00[ASN][1000 genomes]
rs72806132	1.00[ASN][1000 genomes]
rs72806133	1.00[ASN][1000 genomes]
rs72806134	1.00[ASN][1000 genomes]
rs72806135	1.00[ASN][1000 genomes]
rs72806140	1.00[ASN][1000 genomes]
rs72806146	1.00[ASN][1000 genomes]
rs72806149	1.00[ASN][1000 genomes]
rs72806151	1.00[ASN][1000 genomes]
rs72806156	1.00[ASN][1000 genomes]
rs72806158	1.00[ASN][1000 genomes]
rs72806159	1.00[ASN][1000 genomes]
rs72806162	1.00[ASN][1000 genomes]
rs7896287	1.00[ASN][1000 genomes]
rs7899737	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7900123	0.81[AMR][1000 genomes]
rs7907761	1.00[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62060400-62065000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr10:62060600-62067600	Weak transcription	Brain Anterior Caudate	brain
3	chr10:62060800-62064400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr10:62060800-62064400	Weak transcription	HUVEC	blood vessel
5	chr10:62060800-62064400	Weak transcription	K562	blood
6	chr10:62060800-62064600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr10:62060800-62064600	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr10:62060800-62064600	Weak transcription	Brain Hippocampus Middle	brain
9	chr10:62060800-62064600	Weak transcription	Right Atrium	heart
10	chr10:62060800-62064600	Weak transcription	Osteobl	bone
11	chr10:62060800-62065000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr10:62060800-62065000	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr10:62060800-62065000	Weak transcription	Brain Cingulate Gyrus	brain
14	chr10:62060800-62066800	Weak transcription	Brain Angular Gyrus	brain
15	chr10:62060800-62073400	Weak transcription	HUES64 Cell Line	embryonic stem cell
16	chr10:62061600-62064600	Weak transcription	NH-A	brain
17	chr10:62061800-62064800	Weak transcription	Fetal Heart	heart
18	chr10:62061800-62065000	Weak transcription	Brain Substantia Nigra	brain
19	chr10:62062000-62064600	Weak transcription	Brain Inferior Temporal Lobe	brain

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