Variant report

Variant	rs72806131
Chromosome Location	chr10:62144801-62144802
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:62140651..62142796-chr10:62144164..62146237,2	K562	blood:
2	chr10:62107932..62110170-chr10:62143779..62145564,2	K562	blood:
3	chr10:62134131..62136448-chr10:62142813..62145515,2	K562	blood:
4	chr10:62143206..62144981-chr10:62164719..62167070,2	MCF-7	breast:
5	chr10:62056251..62057800-chr10:62142313..62145305,2	K562	blood:

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs12769571	1.00[ASN][1000 genomes]
rs12771158	1.00[ASN][1000 genomes]
rs12782331	1.00[ASN][1000 genomes]
rs1551683	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1551684	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34517433	1.00[ASN][1000 genomes]
rs35204557	1.00[ASN][1000 genomes]
rs35412732	1.00[ASN][1000 genomes]
rs35545571	1.00[ASN][1000 genomes]
rs35628300	1.00[ASN][1000 genomes]
rs36080943	1.00[ASN][1000 genomes]
rs7082025	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7099869	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7100330	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71495636	1.00[ASN][1000 genomes]
rs72806126	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806129	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806132	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806133	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806134	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806135	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806140	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806146	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806149	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806151	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806156	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806158	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806159	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72806162	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7896287	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7899737	1.00[ASN][1000 genomes]
rs7907761	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:57 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62142800-62145000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr10:62142800-62145400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr10:62142800-62145400	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr10:62142800-62145400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr10:62142800-62145400	Enhancers	Osteobl	bone
6	chr10:62142800-62145600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr10:62142800-62145600	Enhancers	NHLF	lung
8	chr10:62142800-62145800	Enhancers	HUVEC	blood vessel
9	chr10:62142800-62145800	Enhancers	NHEK	skin
10	chr10:62142800-62146000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr10:62142800-62146000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr10:62142800-62146000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
13	chr10:62143000-62145400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr10:62143000-62145400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr10:62143000-62145400	Enhancers	Hela-S3	cervix
16	chr10:62143000-62146000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr10:62143000-62146000	Enhancers	HMEC	breast
18	chr10:62143000-62146000	Enhancers	NHDF-Ad	bronchial
19	chr10:62143000-62146600	Enhancers	Brain Substantia Nigra	brain
20	chr10:62143200-62145200	Enhancers	Aorta	Aorta
21	chr10:62143200-62145400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr10:62143600-62145200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr10:62144200-62145000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr10:62144200-62145000	Enhancers	Adipose Nuclei	Adipose
25	chr10:62144200-62145000	Enhancers	Fetal Lung	lung
26	chr10:62144200-62145200	Enhancers	Cortex derived primary cultured neurospheres	brain
27	chr10:62144200-62145200	Flanking Active TSS	Brain Cingulate Gyrus	brain
28	chr10:62144200-62145400	Flanking Active TSS	A549	lung
29	chr10:62144200-62145400	Enhancers	HSMMtube	muscle
30	chr10:62144200-62145800	Flanking Active TSS	Brain Hippocampus Middle	brain
31	chr10:62144200-62146200	Enhancers	Brain Anterior Caudate	brain
32	chr10:62144400-62145200	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
33	chr10:62144400-62145200	Enhancers	Colon Smooth Muscle	Colon
34	chr10:62144400-62146000	Enhancers	Fetal Brain Female	brain
35	chr10:62144400-62146400	Enhancers	Fetal Heart	heart
36	chr10:62144600-62145000	Enhancers	ES-I3 Cell Line	embryonic stem cell
37	chr10:62144600-62145000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr10:62144600-62145000	Flanking Active TSS	Brain Angular Gyrus	brain
39	chr10:62144600-62145000	Enhancers	Esophagus	oesophagus
40	chr10:62144600-62145000	Enhancers	Fetal Muscle Leg	muscle
41	chr10:62144600-62145000	Enhancers	Fetal Stomach	stomach
42	chr10:62144600-62145000	Enhancers	Lung	lung
43	chr10:62144600-62145000	Enhancers	Ovary	ovary
44	chr10:62144600-62145000	Enhancers	Pancreas	Pancrea
45	chr10:62144600-62145000	Enhancers	Stomach Smooth Muscle	stomach
46	chr10:62144600-62145200	Enhancers	Right Ventricle	heart
47	chr10:62144600-62146000	Enhancers	Left Ventricle	heart
48	chr10:62144600-62146000	Enhancers	Right Atrium	heart
49	chr10:62144600-62146000	Enhancers	Skeletal Muscle Female	skeletal muscle
50	chr10:62144800-62145200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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