Variant report

Variant	rs72806126
Chromosome Location	chr10:62142611-62142612
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:62141555..62143240-chr10:62154160..62157030,2	MCF-7	breast:
2	chr10:62140651..62142796-chr10:62144164..62146237,2	K562	blood:
3	chr10:62140904..62143809-chr10:62152084..62153644,2	K562	blood:
4	chr10:62056251..62057800-chr10:62142313..62145305,2	K562	blood:

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1551683	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1551684	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7082025	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7090182	0.80[AFR][1000 genomes]
rs7100330	0.90[EUR][1000 genomes]
rs72806129	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806131	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72806132	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806133	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806134	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806135	0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806140	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806146	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806149	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806151	0.90[EUR][1000 genomes]
rs72806156	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806158	0.90[EUR][1000 genomes]
rs72806159	0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72806162	0.90[EUR][1000 genomes]
rs7896287	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7907761	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:62128200-62143000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr10:62129200-62144400	Weak transcription	Fetal Brain Female	brain
3	chr10:62136600-62144800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr10:62137000-62144600	Weak transcription	Esophagus	oesophagus
5	chr10:62137800-62142800	Weak transcription	NHLF	lung
6	chr10:62138200-62142800	Weak transcription	A549	lung
7	chr10:62138200-62143000	Weak transcription	HMEC	breast
8	chr10:62138400-62142800	Weak transcription	NH-A	brain
9	chr10:62138400-62142800	Weak transcription	NHEK	skin
10	chr10:62138400-62142800	Weak transcription	Osteobl	bone
11	chr10:62138400-62143000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr10:62138400-62143000	Weak transcription	NHDF-Ad	bronchial
13	chr10:62139000-62142800	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr10:62139200-62142800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr10:62140200-62144200	Enhancers	Brain Hippocampus Middle	brain
16	chr10:62140400-62142800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr10:62140800-62144400	Weak transcription	Fetal Heart	heart
18	chr10:62141400-62142800	Weak transcription	Brain Anterior Caudate	brain
19	chr10:62141600-62143000	Weak transcription	Brain Angular Gyrus	brain
20	chr10:62142000-62143000	Weak transcription	Brain Substantia Nigra	brain
21	chr10:62142200-62143000	Weak transcription	Brain Inferior Temporal Lobe	brain
22	chr10:62142400-62142800	Weak transcription	Brain Cingulate Gyrus	brain

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