Variant report

Variant	rs7073937
Chromosome Location	chr10:97469109-97469110
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs11188410	1.00[JPT][hapmap]
rs11188412	1.00[JPT][hapmap]
rs11188415	1.00[JPT][hapmap]
rs11188418	0.82[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs11188419	1.00[JPT][hapmap]
rs11188423	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11188428	0.82[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs11188431	1.00[JPT][hapmap]
rs11188433	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs11188466	1.00[JPT][hapmap]
rs11188469	1.00[JPT][hapmap]
rs11188475	1.00[JPT][hapmap]
rs11188502	1.00[JPT][hapmap]
rs11553577	1.00[JPT][hapmap]
rs11592809	1.00[CHB][hapmap]
rs11595248	1.00[CHB][hapmap]
rs12354465	1.00[CHB][hapmap]
rs12357513	1.00[CHB][hapmap]
rs12358517	1.00[JPT][hapmap]
rs12359410	1.00[CHB][hapmap]
rs12763743	1.00[CHB][hapmap]
rs12767650	1.00[CHB][hapmap]
rs12770849	1.00[CHB][hapmap]
rs12784530	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs1409710	1.00[CHB][hapmap]
rs2275272	1.00[CHB][hapmap]
rs2275760	1.00[JPT][hapmap]
rs2282305	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3176882	1.00[JPT][hapmap]
rs3176886	1.00[CHB][hapmap]
rs3176888	1.00[CHB][hapmap]
rs3181121	1.00[JPT][hapmap]
rs35722210	0.82[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs3793746	1.00[CHB][hapmap]
rs3793751	1.00[CHB][hapmap]
rs3818833	1.00[JPT][hapmap]
rs7080192	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7090630	1.00[JPT][hapmap]
rs7093453	1.00[JPT][hapmap]
rs7100644	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv526180	chr10:97332195-97511037	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv531923	chr10:97366055-97725757	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97458800-97481400	Weak transcription	Primary B cells from cord blood	blood

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