Variant report
Variant | rs72629775 |
---|---|
Chromosome Location | chr10:27997336-27997337 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr10:27997284..27999257-chr10:28002507..28005191,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1002861 | 1.00[EUR][1000 genomes] |
rs1027342 | 1.00[EUR][1000 genomes] |
rs10430558 | 1.00[AMR][1000 genomes] |
rs10430568 | 1.00[AMR][1000 genomes] |
rs10508722 | 1.00[EUR][1000 genomes] |
rs10508724 | 0.86[EUR][1000 genomes] |
rs10764718 | 1.00[EUR][1000 genomes] |
rs10764719 | 1.00[EUR][1000 genomes] |
rs10826346 | 0.86[EUR][1000 genomes] |
rs10829285 | 1.00[EUR][1000 genomes] |
rs10829286 | 1.00[EUR][1000 genomes] |
rs10829294 | 1.00[EUR][1000 genomes] |
rs10829296 | 1.00[EUR][1000 genomes] |
rs10829302 | 1.00[EUR][1000 genomes] |
rs10829304 | 1.00[EUR][1000 genomes] |
rs10829305 | 1.00[EUR][1000 genomes] |
rs11006697 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11006698 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11006699 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11006700 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11006703 | 1.00[AMR][1000 genomes] |
rs11006704 | 1.00[AMR][1000 genomes] |
rs11006705 | 1.00[AMR][1000 genomes] |
rs11006707 | 1.00[AMR][1000 genomes] |
rs11015832 | 0.86[EUR][1000 genomes] |
rs11015833 | 0.86[EUR][1000 genomes] |
rs11015836 | 0.83[EUR][1000 genomes] |
rs11015840 | 0.86[EUR][1000 genomes] |
rs11015856 | 0.86[EUR][1000 genomes] |
rs11015857 | 0.86[EUR][1000 genomes] |
rs11015858 | 0.86[EUR][1000 genomes] |
rs11015875 | 0.86[EUR][1000 genomes] |
rs11015898 | 1.00[EUR][1000 genomes] |
rs11015923 | 1.00[EUR][1000 genomes] |
rs11015927 | 1.00[EUR][1000 genomes] |
rs11015928 | 1.00[EUR][1000 genomes] |
rs11015936 | 1.00[EUR][1000 genomes] |
rs11015938 | 1.00[EUR][1000 genomes] |
rs11015946 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs11015948 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs11015957 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11015958 | 0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11015969 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs11015973 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11015980 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs11015981 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs12217955 | 1.00[EUR][1000 genomes] |
rs12218027 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs12219258 | 0.86[EUR][1000 genomes] |
rs12219955 | 1.00[EUR][1000 genomes] |
rs12220217 | 1.00[EUR][1000 genomes] |
rs12220463 | 0.86[EUR][1000 genomes] |
rs12257550 | 0.86[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12264856 | 1.00[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12411804 | 0.86[EUR][1000 genomes] |
rs12569521 | 1.00[EUR][1000 genomes] |
rs12571836 | 0.86[EUR][1000 genomes] |
rs12572531 | 1.00[EUR][1000 genomes] |
rs17756134 | 0.86[EUR][1000 genomes] |
rs17756253 | 0.86[EUR][1000 genomes] |
rs1907388 | 0.86[EUR][1000 genomes] |
rs2242356 | 0.86[EUR][1000 genomes] |
rs57812861 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs72629761 | 0.86[EUR][1000 genomes] |
rs72629762 | 0.86[EUR][1000 genomes] |
rs72629763 | 0.86[EUR][1000 genomes] |
rs72629764 | 0.86[EUR][1000 genomes] |
rs72629766 | 1.00[EUR][1000 genomes] |
rs72629767 | 1.00[EUR][1000 genomes] |
rs72629772 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs72629773 | 0.95[ASN][1000 genomes] |
rs72629774 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs72629776 | 1.00[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs72629777 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs72629778 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs72631837 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs72631838 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs72631839 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7358151 | 0.86[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8181307 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv550241 | chr10:27569521-28025771 | Enhancers ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 27 gene(s) | inside rSNPs | diseases |
2 | esv3368825 | chr10:27864181-28043820 | Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr10:27985800-28001400 | Weak transcription | Aorta | Aorta |
2 | chr10:27992000-28001400 | Weak transcription | Ovary | ovary |
3 | chr10:27992200-28001600 | Weak transcription | Stomach Smooth Muscle | stomach |