Variant report

Variant	rs72716676
Chromosome Location	chr14:55585670-55585671
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:55583659..55586455-chr14:55591189..55593234,2	K562	blood:
2	chr14:55583230..55586186-chr14:55586316..55587998,2	K562	blood:
3	chr14:55577226..55578815-chr14:55585126..55587716,2	K562	blood:

Extended variants
information (count: 63 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:63)

rs_ID	r²[population]
rs17128147	0.86[EUR][1000 genomes]
rs35954941	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58481989	0.86[EUR][1000 genomes]
rs72715588	0.86[EUR][1000 genomes]
rs72715590	0.86[EUR][1000 genomes]
rs72715591	0.86[EUR][1000 genomes]
rs72715592	0.86[EUR][1000 genomes]
rs72715705	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715707	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715716	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715743	1.00[AMR][1000 genomes]
rs72715749	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715750	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715752	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715756	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715758	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715763	1.00[AMR][1000 genomes]
rs72715765	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715773	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715777	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715782	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715784	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715789	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715791	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715792	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715794	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72716642	0.86[EUR][1000 genomes]
rs72716643	0.86[EUR][1000 genomes]
rs72716648	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72716652	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72716654	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72716661	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72716663	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716665	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716666	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716668	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716677	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716678	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716681	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716688	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716690	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716692	1.00[EUR][1000 genomes]
rs72716698	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72718806	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72718810	1.00[EUR][1000 genomes]
rs72718813	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72718815	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72718818	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72718819	1.00[AMR][1000 genomes]
rs72718821	1.00[AMR][1000 genomes]
rs72718822	1.00[AMR][1000 genomes]
rs72718824	1.00[AMR][1000 genomes]
rs72718831	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718835	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718837	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718840	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718843	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718844	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718845	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718846	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718847	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718850	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718856	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]

No data

Chromatin state (count:69 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55570000-55594800	Enhancers	Fetal Intestine Large	intestine
2	chr14:55575000-55589600	Weak transcription	Small Intestine	intestine
3	chr14:55577600-55594800	Enhancers	Fetal Intestine Small	intestine
4	chr14:55578400-55588000	Weak transcription	Fetal Muscle Trunk	muscle
5	chr14:55580200-55589000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr14:55582200-55585800	Enhancers	K562	blood
7	chr14:55582200-55588200	Enhancers	Right Atrium	heart
8	chr14:55582200-55595600	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr14:55582400-55589000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr14:55583600-55587200	Enhancers	Skeletal Muscle Male	skeletal muscle
11	chr14:55583600-55588800	Weak transcription	Fetal Kidney	kidney
12	chr14:55583800-55586600	Weak transcription	Spleen	Spleen
13	chr14:55583800-55587400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr14:55583800-55589200	Weak transcription	Lung	lung
15	chr14:55583800-55589200	Weak transcription	Pancreas	Pancrea
16	chr14:55583800-55591600	Weak transcription	Gastric	stomach
17	chr14:55584000-55587600	Enhancers	Rectal Mucosa Donor 31	rectum
18	chr14:55584400-55585800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr14:55584400-55586600	Enhancers	Adipose Nuclei	Adipose
20	chr14:55584400-55587000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr14:55584400-55589800	Enhancers	Colonic Mucosa	Colon
22	chr14:55584600-55585800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr14:55584600-55586800	Enhancers	Ovary	ovary
24	chr14:55584600-55587200	Enhancers	Fetal Heart	heart
25	chr14:55584600-55592600	Enhancers	Placenta Amnion	Placenta Amnion
26	chr14:55584800-55585800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
27	chr14:55585000-55586200	Weak transcription	Esophagus	oesophagus
28	chr14:55585000-55586200	Weak transcription	Right Ventricle	heart
29	chr14:55585000-55587000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr14:55585000-55587200	Enhancers	Rectal Mucosa Donor 29	rectum
31	chr14:55585000-55589000	Weak transcription	Colon Smooth Muscle	Colon
32	chr14:55585000-55589400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr14:55585000-55591800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr14:55585200-55586400	Weak transcription	Duodenum Mucosa	Duodenum
35	chr14:55585200-55586800	Weak transcription	Placenta	Placenta
36	chr14:55585200-55587200	Enhancers	Primary neutrophils fromperipheralblood	blood
37	chr14:55585200-55588800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr14:55585200-55589000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr14:55585200-55589200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr14:55585200-55589200	Weak transcription	Brain Inferior Temporal Lobe	brain
41	chr14:55585400-55586600	Weak transcription	Primary B cells from cord blood	blood
42	chr14:55585400-55586600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
43	chr14:55585400-55586600	Enhancers	Duodenum Smooth Muscle	Duodenum
44	chr14:55585400-55588600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
45	chr14:55585400-55588800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr14:55585400-55589000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
47	chr14:55585400-55589000	Weak transcription	Skeletal Muscle Female	skeletal muscle
48	chr14:55585400-55589000	Weak transcription	NH-A	brain
49	chr14:55585400-55589000	Weak transcription	NHDF-Ad	bronchial
50	chr14:55585400-55589200	Weak transcription	HMEC	breast

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