Variant report

Variant	rs72716681
Chromosome Location	chr14:55591524-55591525
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:55583659..55586455-chr14:55591189..55593234,2	K562	blood:

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs17128147	0.86[EUR][1000 genomes]
rs35954941	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58481989	0.86[EUR][1000 genomes]
rs72715588	0.86[EUR][1000 genomes]
rs72715590	0.86[EUR][1000 genomes]
rs72715591	0.86[EUR][1000 genomes]
rs72715592	0.86[EUR][1000 genomes]
rs72715705	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715707	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715716	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715743	1.00[AMR][1000 genomes]
rs72715749	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715750	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715752	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715756	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715758	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715763	1.00[AMR][1000 genomes]
rs72715765	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715773	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715777	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715782	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715784	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715789	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715791	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715792	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72715794	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72716642	0.86[EUR][1000 genomes]
rs72716643	0.86[EUR][1000 genomes]
rs72716648	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72716652	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72716654	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72716661	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72716663	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716665	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716666	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716668	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716676	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716677	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716678	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716688	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716690	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72716692	1.00[EUR][1000 genomes]
rs72716698	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72717703	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72717705	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718806	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72718810	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72718813	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72718815	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72718818	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72718819	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72718821	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72718822	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72718824	1.00[AMR][1000 genomes]
rs72718831	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718835	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718837	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718840	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718843	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718844	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718845	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718846	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718847	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718850	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72718856	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]

No data

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55570000-55594800	Enhancers	Fetal Intestine Large	intestine
2	chr14:55577600-55594800	Enhancers	Fetal Intestine Small	intestine
3	chr14:55582200-55595600	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr14:55583800-55591600	Weak transcription	Gastric	stomach
5	chr14:55584600-55592600	Enhancers	Placenta Amnion	Placenta Amnion
6	chr14:55585000-55591800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr14:55585600-55591600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr14:55586000-55593600	Enhancers	Left Ventricle	heart
9	chr14:55586800-55592600	Enhancers	Placenta	Placenta
10	chr14:55587000-55591600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr14:55587000-55595600	Enhancers	Stomach Mucosa	stomach
12	chr14:55587400-55592600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr14:55587600-55595600	Enhancers	Fetal Heart	heart
14	chr14:55588200-55591600	Weak transcription	Primary B cells from cord blood	blood
15	chr14:55588200-55591600	Enhancers	Monocytes-CD14+_RO01746	blood
16	chr14:55588400-55591600	Weak transcription	Primary neutrophils fromperipheralblood	blood
17	chr14:55588800-55592000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr14:55588800-55594400	Enhancers	Adipose Nuclei	Adipose
19	chr14:55589200-55592800	Enhancers	Lung	lung
20	chr14:55589200-55592800	Enhancers	Right Ventricle	heart
21	chr14:55589200-55593000	Enhancers	Right Atrium	heart
22	chr14:55589200-55593400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr14:55589400-55591600	Enhancers	Rectal Mucosa Donor 31	rectum
24	chr14:55589600-55593000	Enhancers	Esophagus	oesophagus
25	chr14:55589600-55593200	Enhancers	Small Intestine	intestine
26	chr14:55589600-55594600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr14:55589800-55593200	Enhancers	Sigmoid Colon	Sigmoid Colon
28	chr14:55589800-55594000	Weak transcription	HSMM	muscle
29	chr14:55589800-55595600	Weak transcription	Colon Smooth Muscle	Colon
30	chr14:55590000-55591800	Weak transcription	K562	blood
31	chr14:55590000-55592000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr14:55590000-55592000	Weak transcription	GM12878-XiMat	blood
33	chr14:55590000-55593800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr14:55590000-55595400	Weak transcription	Stomach Smooth Muscle	stomach
35	chr14:55590000-55595600	Weak transcription	Rectal Smooth Muscle	rectum
36	chr14:55590000-55595600	Weak transcription	Skeletal Muscle Male	skeletal muscle
37	chr14:55590200-55591600	Enhancers	Rectal Mucosa Donor 29	rectum
38	chr14:55590200-55592000	Weak transcription	HMEC	breast
39	chr14:55590200-55592600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr14:55590200-55593200	Enhancers	Colonic Mucosa	Colon
41	chr14:55590200-55593800	Enhancers	Duodenum Mucosa	Duodenum
42	chr14:55590200-55594000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr14:55590200-55595800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr14:55590400-55591600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr14:55590400-55591800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
46	chr14:55590400-55592200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
47	chr14:55590400-55592200	Weak transcription	NHLF	lung
48	chr14:55590400-55593800	Weak transcription	Muscle Satellite Cultured Cells	--
49	chr14:55590400-55593800	Weak transcription	NHDF-Ad	bronchial
50	chr14:55590400-55595000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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