Variant report

No.	Distal block	Cell Line	Cell type
1	chr20:22904934..22908000-chr20:22908033..22911614,4	K562	blood:
2	chr20:22901686..22903593-chr20:22909582..22911175,2	K562	blood:
3	chr20:22908598..22910990-chr20:22912277..22914789,2	K562	blood:
4	chr20:22391165..22393848-chr20:22908852..22910739,2	K562	blood:
5	chr20:22904934..22907268-chr20:22908600..22911614,3	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1331065	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1331069	1.00[EUR][1000 genomes]
rs16984778	1.00[EUR][1000 genomes]
rs16984879	1.00[EUR][1000 genomes]
rs16984883	1.00[EUR][1000 genomes]
rs16984886	1.00[EUR][1000 genomes]
rs16984958	1.00[EUR][1000 genomes]
rs4289261	1.00[EUR][1000 genomes]
rs57380874	1.00[EUR][1000 genomes]
rs58224951	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59750797	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61044656	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs61060770	1.00[EUR][1000 genomes]
rs61201127	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7271422	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73309806	1.00[EUR][1000 genomes]
rs73309887	1.00[EUR][1000 genomes]
rs73309897	1.00[EUR][1000 genomes]
rs73309899	1.00[EUR][1000 genomes]
rs73311903	1.00[EUR][1000 genomes]
rs73311905	1.00[EUR][1000 genomes]
rs73313506	1.00[EUR][1000 genomes]
rs73313513	1.00[EUR][1000 genomes]
rs73313534	1.00[EUR][1000 genomes]
rs73313539	1.00[EUR][1000 genomes]
rs844810	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv912816	chr20:22757960-23062927	Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:22905800-22912200	Weak transcription	A549	lung
2	chr20:22906600-22918200	Weak transcription	Ovary	ovary
3	chr20:22907000-22912400	Weak transcription	HSMMtube	muscle
4	chr20:22909000-22912400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr20:22910000-22911000	Enhancers	K562	blood
6	chr20:22910200-22910800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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