The 2.0 version of rSNPBase

Variant report

Variant rs72979297
Chromosome Location chr11:105868974-105868975
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:105848200-105880400 Weak transcription Fetal Brain Male brain
2 chr11:105860000-105876400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr11:105860000-105876400 Weak transcription Muscle Satellite Cultured Cells --
4 chr11:105860400-105874200 Weak transcription H1 Cell Line embryonic stem cell
5 chr11:105861200-105879200 Weak transcription HMEC breast
6 chr11:105862800-105883400 Weak transcription Psoas Muscle Psoas
7 chr11:105863000-105876600 Weak transcription Fetal Kidney kidney
8 chr11:105863000-105880200 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr11:105864000-105891600 Weak transcription Colonic Mucosa Colon
10 chr11:105864600-105876600 Weak transcription HSMMtube muscle
11 chr11:105865000-105876600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr11:105865000-105890400 Weak transcription A549 lung
13 chr11:105865200-105869800 Weak transcription Brain Cingulate Gyrus brain
14 chr11:105865200-105873200 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr11:105865200-105874600 Weak transcription Duodenum Mucosa Duodenum
16 chr11:105865200-105876800 Weak transcription Colon Smooth Muscle Colon
17 chr11:105865200-105891600 Weak transcription Hela-S3 cervix
18 chr11:105865400-105874200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr11:105865400-105874200 Weak transcription Placenta Placenta
20 chr11:105865400-105874400 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr11:105865400-105876600 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr11:105865400-105876600 Weak transcription Small Intestine intestine
23 chr11:105865400-105880200 Weak transcription Rectal Smooth Muscle rectum
24 chr11:105865600-105874200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr11:105865600-105875800 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr11:105865800-105879800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr11:105866000-105879800 Weak transcription HUVEC blood vessel
28 chr11:105866200-105876400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr11:105866400-105869400 Weak transcription Right Atrium heart
30 chr11:105866400-105876400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr11:105867000-105870400 Weak transcription Brain Angular Gyrus brain
32 chr11:105867000-105874200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr11:105867000-105874200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr11:105867000-105876400 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr11:105867200-105869800 Weak transcription Brain Inferior Temporal Lobe brain
36 chr11:105867200-105870200 Weak transcription Brain Anterior Caudate brain
37 chr11:105867200-105870200 Weak transcription Brain Substantia Nigra brain
38 chr11:105867200-105871800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr11:105867200-105873200 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr11:105867200-105874000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr11:105867200-105874000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr11:105867200-105874200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr11:105867200-105874600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr11:105867200-105874600 Weak transcription Fetal Lung lung
45 chr11:105867200-105876400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr11:105867200-105876400 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr11:105867200-105876600 Weak transcription NHDF-Ad bronchial
48 chr11:105867200-105876800 Weak transcription Osteobl bone
49 chr11:105867200-105877600 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr11:105867200-105879600 Weak transcription NHLF lung

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Last update: Aug 31, 2015