Variant report

Variant	rs73282491
Chromosome Location	chr14:68447440-68447441
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs34144798	1.00[AMR][1000 genomes]
rs34777538	1.00[AMR][1000 genomes]
rs35050678	1.00[AMR][1000 genomes]
rs56801190	1.00[AMR][1000 genomes]
rs56933151	1.00[AMR][1000 genomes]
rs57556822	1.00[AMR][1000 genomes]
rs57745459	1.00[AMR][1000 genomes]
rs57826383	1.00[AMR][1000 genomes]
rs58407913	1.00[AMR][1000 genomes]
rs60271256	1.00[AMR][1000 genomes]
rs60491097	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61169935	1.00[AMR][1000 genomes]
rs61290854	1.00[AMR][1000 genomes]
rs61512918	1.00[AMR][1000 genomes]
rs73282473	0.84[AFR][1000 genomes]
rs73282490	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73284247	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73284265	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73284273	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73284295	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73286262	1.00[AMR][1000 genomes]
rs73286263	1.00[AMR][1000 genomes]
rs73286265	1.00[AMR][1000 genomes]
rs73286273	1.00[AMR][1000 genomes]
rs73286279	1.00[AMR][1000 genomes]
rs73286288	1.00[AMR][1000 genomes]
rs73288023	1.00[AMR][1000 genomes]
rs73288038	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73288047	1.00[AMR][1000 genomes]
rs73288065	1.00[AMR][1000 genomes]
rs73288068	1.00[AMR][1000 genomes]
rs73288074	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68438600-68451200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr14:68442600-68454400	Weak transcription	Fetal Kidney	kidney
3	chr14:68444600-68449200	Weak transcription	Fetal Intestine Small	intestine
4	chr14:68444600-68449400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr14:68444600-68449600	Weak transcription	Stomach Mucosa	stomach
6	chr14:68444600-68449600	Weak transcription	HMEC	breast
7	chr14:68444800-68449600	Weak transcription	A549	lung
8	chr14:68445800-68449600	Weak transcription	Fetal Lung	lung
9	chr14:68445800-68451000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr14:68445800-68454600	Weak transcription	Ovary	ovary
11	chr14:68446000-68448000	Weak transcription	Psoas Muscle	Psoas
12	chr14:68446000-68449400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr14:68446000-68451200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr14:68446400-68449200	Weak transcription	Cortex derived primary cultured neurospheres	brain
15	chr14:68446400-68449400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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