Variant report

Variant	rs73284247
Chromosome Location	chr14:68504779-68504780
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:68497334..68499807-chr14:68504444..68506718,2	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs34144798	1.00[AMR][1000 genomes]
rs34777538	1.00[AMR][1000 genomes]
rs35050678	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56801190	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56933151	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57556822	1.00[AMR][1000 genomes]
rs57745459	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57826383	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58407913	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60271256	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60491097	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61169935	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61290854	1.00[AMR][1000 genomes]
rs61512918	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73282473	1.00[AFR][1000 genomes]
rs73282490	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73282491	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73284265	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73284273	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73284295	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73286262	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73286263	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73286265	1.00[AMR][1000 genomes]
rs73286273	1.00[AMR][1000 genomes]
rs73286279	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73286288	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73288023	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73288038	1.00[AMR][1000 genomes]
rs73288047	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73288065	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73288068	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73288074	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68494800-68506200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr14:68497400-68506200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:68499400-68508400	Weak transcription	Fetal Kidney	kidney
4	chr14:68499800-68512600	Weak transcription	Adipose Nuclei	Adipose
5	chr14:68499800-68516200	Weak transcription	Primary hematopoietic stem cells	blood
6	chr14:68500600-68507400	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr14:68501200-68507400	Weak transcription	Ovary	ovary
8	chr14:68501200-68508200	Weak transcription	Fetal Muscle Leg	muscle
9	chr14:68502400-68505600	Enhancers	Fetal Stomach	stomach
10	chr14:68503000-68507600	Weak transcription	Stomach Smooth Muscle	stomach
11	chr14:68503000-68508200	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr14:68503200-68506400	Weak transcription	HUES48 Cell Line	embryonic stem cell
13	chr14:68503400-68506400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
14	chr14:68503400-68506600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
15	chr14:68503400-68509200	Weak transcription	Fetal Intestine Small	intestine
16	chr14:68503400-68509200	Weak transcription	Stomach Mucosa	stomach
17	chr14:68503600-68519800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr14:68504000-68505200	Enhancers	Fetal Lung	lung
19	chr14:68504200-68505400	Enhancers	Rectal Smooth Muscle	rectum
20	chr14:68504400-68504800	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr14:68504400-68505400	Enhancers	Colon Smooth Muscle	Colon
22	chr14:68504600-68505400	Enhancers	HUES64 Cell Line	embryonic stem cell

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