The 2.0 version of rSNPBase

Variant report

Variant rs34777538
Chromosome Location chr14:68578512-68578513
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:68569200-68579200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr14:68571800-68580200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr14:68572000-68580200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr14:68573600-68579400 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr14:68573600-68580200 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr14:68573800-68591800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr14:68575200-68580800 Enhancers NHDF-Ad bronchial
8 chr14:68575800-68578600 Enhancers Primary hematopoietic stem cells short term culture blood
9 chr14:68575800-68578800 Enhancers Rectal Smooth Muscle rectum
10 chr14:68575800-68579400 Enhancers Fetal Stomach stomach
11 chr14:68575800-68579600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr14:68575800-68579600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr14:68576000-68578800 Enhancers Adipose Nuclei Adipose
14 chr14:68576000-68579000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr14:68576000-68580800 Enhancers Fetal Intestine Large intestine
16 chr14:68576000-68581000 Enhancers Fetal Intestine Small intestine
17 chr14:68576200-68578600 Enhancers Primary hematopoietic stem cells blood
18 chr14:68576200-68579400 Enhancers Rectal Mucosa Donor 31 rectum
19 chr14:68576200-68580000 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr14:68576400-68578800 Enhancers Pancreatic Islets Pancreatic Islet
21 chr14:68576400-68580200 Weak transcription Osteobl bone
22 chr14:68576400-68592000 Weak transcription Psoas Muscle Psoas
23 chr14:68576600-68578800 Enhancers Dnd41 blood
24 chr14:68576600-68580000 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr14:68576600-68580200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr14:68576800-68579400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr14:68577200-68578600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr14:68577200-68579000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr14:68577400-68579000 Enhancers A549 lung
30 chr14:68577400-68581000 Enhancers Fetal Kidney kidney
31 chr14:68577600-68578600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr14:68577600-68578600 Enhancers Primary T killer memory cells from peripheral blood blood
33 chr14:68577600-68578800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr14:68577600-68578800 Enhancers Primary T helper 17 cells PMA-I stimulated --
35 chr14:68577800-68578800 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr14:68577800-68578800 Enhancers GM12878-XiMat blood
37 chr14:68577800-68579000 Enhancers Fetal Brain Female brain
38 chr14:68577800-68579400 Enhancers Cortex derived primary cultured neurospheres brain
39 chr14:68577800-68579400 Enhancers Brain Germinal Matrix brain
40 chr14:68577800-68579400 Enhancers Fetal Muscle Leg muscle
41 chr14:68577800-68580800 Enhancers Duodenum Mucosa Duodenum
42 chr14:68578000-68578600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr14:68578000-68578600 Enhancers Primary T cells from cord blood blood
44 chr14:68578000-68578800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr14:68578000-68578800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
46 chr14:68578000-68579000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr14:68578000-68579000 Enhancers Colon Smooth Muscle Colon
48 chr14:68578000-68579000 Enhancers Rectal Mucosa Donor 29 rectum
49 chr14:68578200-68578600 Flanking Active TSS Fetal Lung lung
50 chr14:68578200-68578800 Enhancers Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015