The 2.0 version of rSNPBase

Variant report

Variant rs73470749
Chromosome Location chr11:58396240-58396241
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58377200-58397200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr11:58385200-58397000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr11:58385600-58400400 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr11:58386800-58400000 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr11:58391800-58397400 Genic enhancers HSMM muscle
6 chr11:58392000-58397000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr11:58392000-58406000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr11:58392200-58397600 Weak transcription Esophagus oesophagus
9 chr11:58392200-58399200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr11:58392200-58400800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr11:58392400-58397200 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr11:58392400-58402000 Weak transcription Fetal Intestine Small intestine
13 chr11:58392600-58400600 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr11:58392800-58396600 Weak transcription Fetal Brain Male brain
15 chr11:58392800-58397600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr11:58392800-58399400 Weak transcription Lung lung
17 chr11:58393000-58397400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr11:58393000-58397600 Weak transcription Spleen Spleen
19 chr11:58393000-58398600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr11:58393000-58400000 Weak transcription Ovary ovary
21 chr11:58393000-58407200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr11:58393200-58398600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr11:58393200-58398600 Weak transcription Fetal Stomach stomach
24 chr11:58393200-58399600 Weak transcription Right Ventricle heart
25 chr11:58393200-58400200 Weak transcription H9 Cell Line embryonic stem cell
26 chr11:58393200-58407000 Weak transcription Thymus Thymus
27 chr11:58393400-58397600 Weak transcription Primary neutrophils fromperipheralblood blood
28 chr11:58393600-58396600 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr11:58393600-58399000 Weak transcription Pancreas Pancrea
30 chr11:58393800-58396800 Weak transcription Primary B cells from cord blood blood
31 chr11:58393800-58397000 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr11:58393800-58397200 Enhancers NHDF-Ad bronchial
33 chr11:58393800-58397800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr11:58393800-58399400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr11:58393800-58401000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr11:58393800-58406200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr11:58393800-58407800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr11:58394000-58396800 Weak transcription Brain Germinal Matrix brain
39 chr11:58394000-58397000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr11:58394000-58398400 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr11:58394000-58398800 Weak transcription Fetal Brain Female brain
42 chr11:58394000-58399400 Weak transcription Liver Liver
43 chr11:58394000-58399800 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr11:58394000-58407200 Weak transcription Left Ventricle heart
45 chr11:58394000-58407800 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr11:58394200-58397600 Weak transcription Placenta Placenta
47 chr11:58394400-58397200 Enhancers Skeletal Muscle Male skeletal muscle
48 chr11:58394400-58397200 Enhancers Skeletal Muscle Female skeletal muscle
49 chr11:58394600-58396400 Enhancers Brain Hippocampus Middle brain
50 chr11:58394600-58397400 Enhancers HMEC breast

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Last update: Aug 31, 2015