The 2.0 version of rSNPBase

Variant report

Variant rs73470711
Chromosome Location chr11:58329969-58329970
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58300000-58340600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr11:58300600-58338600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr11:58309000-58336200 Weak transcription NHEK skin
4 chr11:58309600-58338800 Strong transcription Primary monocytes fromperipheralblood blood
5 chr11:58310000-58330000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr11:58310600-58331000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr11:58315600-58340400 Weak transcription Stomach Mucosa stomach
8 chr11:58318000-58330000 Weak transcription Small Intestine intestine
9 chr11:58318200-58336400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr11:58318400-58341000 Weak transcription Right Ventricle heart
11 chr11:58318400-58344800 Weak transcription Fetal Brain Male brain
12 chr11:58318600-58344400 Weak transcription Placenta Amnion Placenta Amnion
13 chr11:58318800-58332000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr11:58318800-58336800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr11:58318800-58340600 Weak transcription NHLF lung
16 chr11:58318800-58341400 Weak transcription Psoas Muscle Psoas
17 chr11:58319200-58343000 Weak transcription Fetal Brain Female brain
18 chr11:58320000-58330000 Weak transcription Aorta Aorta
19 chr11:58320000-58330000 Weak transcription Gastric stomach
20 chr11:58320000-58330000 Weak transcription Pancreas Pancrea
21 chr11:58320000-58341000 Weak transcription HSMMtube muscle
22 chr11:58320200-58340800 Weak transcription Colon Smooth Muscle Colon
23 chr11:58320600-58338200 Weak transcription HMEC breast
24 chr11:58321600-58336400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr11:58321600-58337200 Weak transcription Rectal Smooth Muscle rectum
26 chr11:58321600-58340400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr11:58321800-58330000 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr11:58321800-58340400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr11:58321800-58341200 Weak transcription Colonic Mucosa Colon
30 chr11:58321800-58345000 Weak transcription Ovary ovary
31 chr11:58322000-58336400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr11:58322200-58332400 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr11:58322200-58336400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr11:58322200-58337000 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr11:58322400-58330000 Weak transcription Lung lung
36 chr11:58322400-58330000 Weak transcription Thymus Thymus
37 chr11:58322400-58330200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr11:58322400-58332400 Weak transcription Fetal Stomach stomach
39 chr11:58322400-58335000 Weak transcription Dnd41 blood
40 chr11:58322400-58336200 Weak transcription Placenta Placenta
41 chr11:58322400-58336400 Weak transcription Fetal Muscle Leg muscle
42 chr11:58322400-58336800 Weak transcription Spleen Spleen
43 chr11:58322400-58344200 Weak transcription Fetal Lung lung
44 chr11:58324400-58336000 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr11:58326000-58330000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr11:58326400-58331600 Strong transcription Primary B cells from cord blood blood
47 chr11:58327000-58332400 Enhancers Fetal Intestine Small intestine
48 chr11:58327200-58330000 Strong transcription Primary B cells from peripheral blood blood
49 chr11:58327200-58332400 Enhancers Fetal Intestine Large intestine
50 chr11:58327200-58336400 Genic enhancers Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015