Variant report

Variant	rs73598526
Chromosome Location	chr10:22733454-22733455
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:22732732..22735397-chr10:22740047..22741677,2	K562	blood:
2	chr10:22731789..22734479-chr10:22734948..22737688,3	K562	blood:
3	chr10:22729078..22734479-chr10:22734589..22737865,6	K562	blood:
4	chr10:22724628..22727475-chr10:22730880..22733467,2	K562	blood:
5	chr10:22608440..22611101-chr10:22731642..22733769,3	K562	blood:
6	chr10:22732081..22734232-chr10:22738993..22741677,2	K562	blood:

Variant related genes	Relation type
ENSG00000168283	Chromatin interaction

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10508644	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11012931	1.00[EUR][1000 genomes]
rs11012991	1.00[ASN][1000 genomes]
rs11012993	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11012994	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11012996	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11012997	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11012999	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11818252	1.00[EUR][1000 genomes]
rs12251592	1.00[EUR][1000 genomes]
rs12253013	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12256920	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12258806	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12265728	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16922126	1.00[EUR][1000 genomes]
rs16922139	1.00[EUR][1000 genomes]
rs16922277	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16922285	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3004	1.00[ASN][1000 genomes]
rs55869957	1.00[EUR][1000 genomes]
rs6482213	1.00[ASN][1000 genomes]
rs6482214	1.00[ASN][1000 genomes]
rs6482215	1.00[ASN][1000 genomes]
rs7079531	1.00[ASN][1000 genomes]
rs73598513	1.00[ASN][1000 genomes]
rs73598514	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73598515	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73598517	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73598520	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73598521	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73598527	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73598531	1.00[EUR][1000 genomes]
rs74121396	1.00[EUR][1000 genomes]
rs74123059	1.00[EUR][1000 genomes]
rs74123070	1.00[EUR][1000 genomes]
rs7898929	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7899794	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7914254	1.00[ASN][1000 genomes]
rs7918856	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7918879	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7919362	1.00[EUR][1000 genomes]
rs9783118	1.00[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22728000-22734200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr10:22732000-22733800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr10:22732200-22733600	Enhancers	Primary B cells from peripheral blood	blood
4	chr10:22732800-22733600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr10:22733000-22734200	Weak transcription	HepG2	liver
6	chr10:22733200-22734600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr10:22733400-22733600	Enhancers	GM12878-XiMat	blood

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