The 2.0 version of rSNPBase

Variant report

Variant rs73775315
Chromosome Location chr6:131175881-131175882
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:131149400-131213200 Weak transcription Pancreas Pancrea
2 chr6:131150600-131183400 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr6:131151600-131216600 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr6:131158200-131179400 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr6:131158200-131190600 Weak transcription Spleen Spleen
6 chr6:131158200-131214400 Weak transcription Lung lung
7 chr6:131159000-131229000 Weak transcription Colonic Mucosa Colon
8 chr6:131160600-131179200 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr6:131161000-131186600 Weak transcription Brain Cingulate Gyrus brain
10 chr6:131161600-131176800 Weak transcription Dnd41 blood
11 chr6:131161800-131186400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr6:131168400-131190600 Weak transcription Duodenum Mucosa Duodenum
13 chr6:131168600-131179000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr6:131168800-131214600 Weak transcription Fetal Kidney kidney
15 chr6:131170000-131189000 Strong transcription Adipose Nuclei Adipose
16 chr6:131170200-131179000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr6:131170400-131178400 Weak transcription NHEK skin
18 chr6:131170400-131181200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr6:131170400-131193000 Weak transcription Fetal Thymus thymus
20 chr6:131170400-131217400 Weak transcription Psoas Muscle Psoas
21 chr6:131170600-131178600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr6:131170600-131184600 Weak transcription Primary B cells from peripheral blood blood
23 chr6:131170600-131187000 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr6:131170600-131190400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr6:131170600-131192600 Weak transcription Primary hematopoietic stem cells blood
26 chr6:131170600-131193000 Weak transcription Primary T cells from cord blood blood
27 chr6:131170600-131213800 Weak transcription GM12878-XiMat blood
28 chr6:131170800-131189000 Strong transcription Fetal Muscle Trunk muscle
29 chr6:131171200-131209600 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr6:131171200-131223200 Weak transcription Right Ventricle heart
31 chr6:131171400-131220200 Weak transcription Fetal Brain Male brain
32 chr6:131172200-131176000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr6:131172200-131176200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
34 chr6:131172600-131185600 Weak transcription Gastric stomach
35 chr6:131172600-131186600 Weak transcription Brain Angular Gyrus brain
36 chr6:131172800-131183400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr6:131172800-131189400 Weak transcription Brain Inferior Temporal Lobe brain
38 chr6:131173000-131179200 Weak transcription Brain Hippocampus Middle brain
39 chr6:131173000-131207000 Weak transcription Brain Substantia Nigra brain
40 chr6:131173200-131185200 Weak transcription Thymus Thymus
41 chr6:131173400-131190800 Weak transcription Esophagus oesophagus
42 chr6:131174400-131185600 Weak transcription Primary B cells from cord blood blood
43 chr6:131174800-131179000 Weak transcription Stomach Smooth Muscle stomach
44 chr6:131175000-131182000 Weak transcription Placenta Placenta
45 chr6:131175000-131185400 Weak transcription Aorta Aorta
46 chr6:131175000-131222400 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr6:131175200-131176000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
48 chr6:131175200-131176000 Weak transcription Fetal Stomach stomach
49 chr6:131175200-131176200 Enhancers HepG2 liver
50 chr6:131175200-131178800 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015