Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10496631	1.00[ASN][1000 genomes]
rs11675400	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11677801	1.00[ASN][1000 genomes]
rs11678185	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11680010	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11680902	1.00[ASN][1000 genomes]
rs11686392	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11689672	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11693472	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11693557	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11694708	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17209500	1.00[ASN][1000 genomes]
rs17212475	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17269066	1.00[ASN][1000 genomes]
rs17269122	1.00[ASN][1000 genomes]
rs17270902	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17279639	0.81[EUR][1000 genomes]
rs17319680	1.00[ASN][1000 genomes]
rs17722007	1.00[ASN][1000 genomes]
rs73954528	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs779988	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531408	chr2:124727329-125011247	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv2762279	chr2:124827023-124840027	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:124836600-124839600	Enhancers	Fetal Intestine Small	intestine
2	chr2:124839200-124839600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr2:124839200-124839600	Enhancers	Duodenum Mucosa	Duodenum
4	chr2:124839200-124839600	Enhancers	Fetal Intestine Large	intestine

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