Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10496631	1.00[ASN][1000 genomes]
rs11675400	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11677801	1.00[ASN][1000 genomes]
rs11680010	1.00[ASN][1000 genomes]
rs11680902	1.00[ASN][1000 genomes]
rs11683942	0.86[EUR][1000 genomes]
rs11686392	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11687196	0.86[EUR][1000 genomes]
rs11689672	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11693472	1.00[ASN][1000 genomes]
rs11693557	1.00[ASN][1000 genomes]
rs11694708	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1430268	1.00[ASN][1000 genomes]
rs1529296	1.00[ASN][1000 genomes]
rs17209500	1.00[ASN][1000 genomes]
rs17212475	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17269066	1.00[ASN][1000 genomes]
rs17269122	1.00[ASN][1000 genomes]
rs17270902	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17279639	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17319680	1.00[ASN][1000 genomes]
rs17665763	1.00[ASN][1000 genomes]
rs17665782	1.00[ASN][1000 genomes]
rs17666092	1.00[ASN][1000 genomes]
rs17666152	1.00[ASN][1000 genomes]
rs17666488	1.00[ASN][1000 genomes]
rs17722007	1.00[ASN][1000 genomes]
rs17722506	1.00[ASN][1000 genomes]
rs17722749	1.00[ASN][1000 genomes]
rs73954526	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73954528	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs779988	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531408	chr2:124727329-125011247	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:124866800-124867400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr2:124867000-124867600	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr2:124867000-124868600	Enhancers	HUES48 Cell Line	embryonic stem cell

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