Variant report

Variant	rs73954528
Chromosome Location	chr2:124847662-124847663
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10496631	1.00[ASN][1000 genomes]
rs11675400	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11677801	1.00[ASN][1000 genomes]
rs11678185	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11680010	1.00[ASN][1000 genomes]
rs11680902	1.00[ASN][1000 genomes]
rs11683942	0.81[EUR][1000 genomes]
rs11686392	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11687196	0.81[EUR][1000 genomes]
rs11689672	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11693472	1.00[ASN][1000 genomes]
rs11693557	1.00[ASN][1000 genomes]
rs11694708	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17209500	1.00[ASN][1000 genomes]
rs17212475	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17269066	1.00[ASN][1000 genomes]
rs17269122	1.00[ASN][1000 genomes]
rs17270902	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17279639	0.83[EUR][1000 genomes]
rs17319680	1.00[ASN][1000 genomes]
rs17665763	1.00[ASN][1000 genomes]
rs17665782	1.00[ASN][1000 genomes]
rs17666092	1.00[ASN][1000 genomes]
rs17722007	1.00[ASN][1000 genomes]
rs17722506	1.00[ASN][1000 genomes]
rs73954526	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs779988	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531408	chr2:124727329-125011247	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:124847400-124849400	Weak transcription	Fetal Intestine Large	intestine
2	chr2:124847600-124849200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr2:124847600-124849200	Weak transcription	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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