Variant report

Variant	rs74149191
Chromosome Location	chr10:94750283-94750284
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:94742230..94747039-chr10:94747963..94752484,4	K562	blood:
2	chr10:94744689..94747532-chr10:94748768..94751037,3	K562	blood:
3	chr10:94740523..94743035-chr10:94748693..94750893,2	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10509648	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17093820	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17107949	1.00[EUR][1000 genomes]
rs17107967	1.00[EUR][1000 genomes]
rs17107977	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17108019	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1806690	1.00[EUR][1000 genomes]
rs1986356	1.00[EUR][1000 genomes]
rs3740379	1.00[EUR][1000 genomes]
rs55929600	1.00[EUR][1000 genomes]
rs57283335	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57988954	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58753829	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs60626109	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61426198	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6583848	0.81[ASN][1000 genomes]
rs6583849	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7069896	1.00[EUR][1000 genomes]
rs74149153	1.00[EUR][1000 genomes]
rs74149155	1.00[EUR][1000 genomes]
rs74149158	1.00[EUR][1000 genomes]
rs74149160	1.00[EUR][1000 genomes]
rs74149162	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74149166	1.00[EUR][1000 genomes]
rs74149170	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74149171	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs74149175	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs74149183	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs74149184	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs74149188	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895898	chr10:94628274-94810665	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv518124	chr10:94660133-94778283	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
3	nsv522103	chr10:94660133-94810665	ZNF genes & repeats Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
4	nsv551941	chr10:94670849-94782735	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv551942	chr10:94695617-94810665	Strong transcription Weak transcription ZNF genes & repeats Active TSS Enhancers Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
6	nsv467435	chr10:94716313-94779550	ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Genic enhancers Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
7	nsv551943	chr10:94716313-94779550	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94712600-94787800	Weak transcription	Left Ventricle	heart
2	chr10:94713200-94819400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr10:94730800-94753400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr10:94730800-94773400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
5	chr10:94731600-94777200	Weak transcription	Primary T helper cells fromperipheralblood	blood
6	chr10:94732600-94780800	Weak transcription	Psoas Muscle	Psoas
7	chr10:94732800-94750400	Weak transcription	Primary hematopoietic stem cells	blood
8	chr10:94733600-94750400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr10:94734000-94750400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
10	chr10:94735000-94759200	Weak transcription	Primary neutrophils fromperipheralblood	blood
11	chr10:94736000-94753600	Weak transcription	Gastric	stomach
12	chr10:94737800-94760000	Weak transcription	Primary B cells from cord blood	blood
13	chr10:94741400-94760800	Weak transcription	HUVEC	blood vessel
14	chr10:94746400-94753000	Weak transcription	Primary T cells from cord blood	blood
15	chr10:94748000-94750400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr10:94748800-94750400	Enhancers	HUES48 Cell Line	embryonic stem cell
17	chr10:94748800-94750800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr10:94748800-94751800	Enhancers	K562	blood
19	chr10:94749000-94774000	Weak transcription	Colon Smooth Muscle	Colon
20	chr10:94749200-94750400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr10:94749400-94750400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
22	chr10:94749600-94753600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
23	chr10:94750000-94751800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr10:94750000-94751800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr10:94750000-94790200	Weak transcription	Duodenum Smooth Muscle	Duodenum
26	chr10:94750200-94750400	Enhancers	iPS-18 Cell Line	embryonic stem cell
27	chr10:94750200-94750600	Enhancers	GM12878-XiMat	blood
28	chr10:94750200-94750800	Enhancers	HUES6 Cell Line	embryonic stem cell
29	chr10:94750200-94750800	Enhancers	Rectal Smooth Muscle	rectum

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