Variant report

Variant	rs74149153
Chromosome Location	chr10:94589938-94589939
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	IRF1	chr10:94589710-94589948	K562	blood:	n/a	n/a
2	POLR2A	chr10:94588764-94590111	K562	blood:	n/a	n/a
3	ARID3A	chr10:94588852-94590577	K562	blood:	n/a	n/a
4	STAT5A	chr10:94589456-94590092	K562	blood:	n/a	n/a
5	TBP	chr10:94588745-94591182	K562	blood:	n/a	n/a
6	POLR2A	chr10:94588704-94589986	K562	blood:	n/a	n/a
7	POLR2A	chr10:94588724-94591134	K562	blood:	n/a	n/a
8	POLR2A	chr10:94588760-94591174	K562	blood:	n/a	n/a
9	MXI1	chr10:94589688-94590205	K562	blood:	n/a	n/a
10	POLR2A	chr10:94588682-94591206	K562	blood:	n/a	n/a
11	POLR2A	chr10:94588747-94591200	K562	blood:	n/a	n/a
12	HEY1	chr10:94588686-94590025	K562	blood:	n/a	n/a
13	POLR2A	chr10:94588647-94591210	K562	blood:	n/a	n/a
14	IRF1	chr10:94588740-94590045	K562	blood:	n/a	n/a
15	MYC	chr10:94588674-94589985	K562	blood:	n/a	chr10:94588893-94588903
16	HEY1	chr10:94588745-94589951	K562	blood:	n/a	n/a
17	STAT1	chr10:94589275-94590158	Hela-S3	cervix:	n/a	chr10:94589734-94589745 chr10:94589755-94589766
18	TAL1	chr10:94588718-94590002	K562	blood:	n/a	n/a
19	PML	chr10:94588768-94589962	K562	blood:	n/a	n/a
20	STAT5A	chr10:94588723-94590610	K562	blood:	n/a	n/a
21	POLR2A	chr10:94588674-94589954	K562	blood:	n/a	n/a
22	JUND	chr10:94588631-94591161	K562	blood:	n/a	chr10:94590158-94590168 chr10:94590746-94590758 chr10:94590158-94590168 chr10:94590158-94590168 chr10:94590159-94590167 chr10:94590158-94590168

No.	Distal block	Cell Line	Cell type
1	chr10:94585721..94590083-chr10:94591817..94595632,6	K562	blood:
2	chr10:94588694..94590341-chr10:94592068..94595794,3	MCF-7	breast:
3	chr10:94558052..94561125-chr10:94589209..94590928,3	K562	blood:
4	chr10:94351725..94353301-chr10:94589609..94592418,2	K562	blood:
5	chr10:94509172..94511592-chr10:94588943..94590877,2	K562	blood:
6	chr10:94589013..94590619-chr10:94619184..94621035,2	K562	blood:
7	chr10:94449603..94452740-chr10:94589464..94592452,3	K562	blood:

Variant related genes	Relation type
EXOC6	TF binding region
ENSG00000138160	Chromatin interaction
ENSG00000152804	Chromatin interaction
ENSG00000138190	Chromatin interaction

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10509648	1.00[EUR][1000 genomes]
rs17093820	1.00[EUR][1000 genomes]
rs17107949	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17107967	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17107977	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs17108019	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1806690	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1986356	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3740379	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55929600	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57283335	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs57988954	1.00[EUR][1000 genomes]
rs58753829	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs60626109	1.00[EUR][1000 genomes]
rs61426198	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6583849	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7069896	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs74149155	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74149158	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs74149160	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74149162	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs74149166	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs74149170	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74149171	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs74149175	1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs74149183	1.00[EUR][1000 genomes]
rs74149184	1.00[EUR][1000 genomes]
rs74149185	0.83[AFR][1000 genomes]
rs74149188	1.00[EUR][1000 genomes]
rs74149191	1.00[EUR][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94581600-94592800	Weak transcription	Lung	lung
2	chr10:94582600-94590400	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr10:94582800-94592800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr10:94583000-94590400	Weak transcription	Primary hematopoietic stem cells	blood
5	chr10:94585600-94593000	Weak transcription	Psoas Muscle	Psoas
6	chr10:94586200-94590200	Weak transcription	Primary B cells from peripheral blood	blood
7	chr10:94586400-94590400	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr10:94586400-94590400	Weak transcription	HepG2	liver
9	chr10:94586400-94590400	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr10:94586600-94590200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr10:94586800-94590400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr10:94586800-94590400	Weak transcription	Skeletal Muscle Male	skeletal muscle
13	chr10:94587200-94590400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr10:94587800-94590800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
15	chr10:94588200-94593000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr10:94588800-94590200	Enhancers	HUVEC	blood vessel
17	chr10:94589000-94590800	Enhancers	Left Ventricle	heart
18	chr10:94589000-94591600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
19	chr10:94589000-94591600	Enhancers	Fetal Muscle Leg	muscle
20	chr10:94589000-94598000	Weak transcription	H9 Cell Line	embryonic stem cell
21	chr10:94589400-94590200	Weak transcription	Right Atrium	heart
22	chr10:94589400-94590200	Weak transcription	Spleen	Spleen
23	chr10:94589400-94590400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr10:94589400-94592800	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr10:94589400-94599200	Weak transcription	HUES6 Cell Line	embryonic stem cell
26	chr10:94589600-94590200	Active TSS	K562	blood

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