Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:166024583..166029785-chr1:166030056..166033547,5	K562	blood:

Variant related genes	Relation type
ENSG00000267884	Chromatin interaction

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10082085	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10436882	0.87[ASW][hapmap];1.00[MEX][hapmap];0.90[AMR][1000 genomes]
rs10918334	1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs10918337	0.83[AMR][1000 genomes]
rs12062293	0.87[ASW][hapmap];1.00[MEX][hapmap];0.83[AMR][1000 genomes]
rs12070881	0.87[ASW][hapmap];0.92[MKK][hapmap]
rs12079541	0.90[AMR][1000 genomes]
rs12081735	0.87[ASW][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.90[AMR][1000 genomes]
rs16855520	1.00[MEX][hapmap]
rs16856607	1.00[MEX][hapmap]
rs16856694	1.00[MEX][hapmap]
rs58453027	0.90[AMR][1000 genomes]
rs6426963	0.83[AMR][1000 genomes]
rs6677013	1.00[MEX][hapmap]
rs73024171	0.83[AMR][1000 genomes]
rs73024183	0.83[AMR][1000 genomes]
rs73024189	0.91[AMR][1000 genomes]
rs73033908	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73033912	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73033931	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73033937	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73033944	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73033949	0.83[AMR][1000 genomes]
rs7524282	0.83[AMR][1000 genomes]
rs7526838	0.83[AMR][1000 genomes]
rs7540985	0.94[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7541117	0.93[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9651038	0.87[ASW][hapmap];0.92[MKK][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916491	chr1:166000783-166948513	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:166024400-166032600	Weak transcription	Spleen	Spleen
2	chr1:166027400-166031600	Weak transcription	Brain Germinal Matrix	brain
3	chr1:166027600-166034800	Weak transcription	Fetal Brain Female	brain
4	chr1:166027800-166032800	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr1:166028200-166031600	Weak transcription	Fetal Brain Male	brain
6	chr1:166028600-166033200	Weak transcription	Pancreas	Pancrea
7	chr1:166028800-166031800	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr1:166029000-166033000	Weak transcription	Right Atrium	heart

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