The 2.0 version of rSNPBase

Variant report

Variant rs7554767
Chromosome Location chr1:174984205-174984206
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174970000-174991800 Weak transcription Stomach Mucosa stomach
2 chr1:174970800-174986000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:174971000-174991600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:174973000-174990600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:174973200-174987800 Strong transcription HUES48 Cell Line embryonic stem cell
6 chr1:174973200-174987800 Strong transcription HUES64 Cell Line embryonic stem cell
7 chr1:174973200-174988200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:174973600-174987800 Strong transcription HUES6 Cell Line embryonic stem cell
9 chr1:174973600-174988200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:174973600-174990400 Strong transcription Primary T cells from cord blood blood
11 chr1:174973800-174984600 Strong transcription NHDF-Ad bronchial
12 chr1:174973800-174987600 Strong transcription iPS-18 Cell Line embryonic stem cell
13 chr1:174973800-174987800 Strong transcription H1 Cell Line embryonic stem cell
14 chr1:174973800-174987800 Strong transcription iPS-20b Cell Line embryonic stem cell
15 chr1:174973800-174987800 Strong transcription Primary T cells fromperipheralblood blood
16 chr1:174973800-174987800 Strong transcription Fetal Intestine Large intestine
17 chr1:174973800-174987800 Strong transcription Fetal Muscle Trunk muscle
18 chr1:174973800-174988200 Strong transcription Primary hematopoietic stem cells blood
19 chr1:174973800-174988400 Strong transcription Fetal Thymus thymus
20 chr1:174973800-174988800 Strong transcription Primary B cells from peripheral blood blood
21 chr1:174973800-174988800 Strong transcription Fetal Adrenal Gland Adrenal Gland
22 chr1:174973800-174989800 Strong transcription Primary T helper cells fromperipheralblood blood
23 chr1:174974000-174987800 Strong transcription Liver Liver
24 chr1:174974000-174988200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:174974000-174988400 Strong transcription Duodenum Mucosa Duodenum
26 chr1:174974200-174984400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:174974200-174985200 Strong transcription Fetal Muscle Leg muscle
28 chr1:174974200-174987600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr1:174974200-174987800 Strong transcription Breast Myoepithelial Primary Cells Breast
30 chr1:174974200-174987800 Strong transcription Primary hematopoietic stem cells short term culture blood
31 chr1:174974200-174987800 Strong transcription Rectal Mucosa Donor 31 rectum
32 chr1:174974200-174987800 Strong transcription Sigmoid Colon Sigmoid Colon
33 chr1:174974200-174987800 Strong transcription A549 lung
34 chr1:174974200-174987800 Strong transcription HMEC breast
35 chr1:174974200-174987800 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr1:174974200-174988200 Strong transcription Thymus Thymus
37 chr1:174974200-174988400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr1:174974200-174988400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:174974200-174988800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr1:174974200-174990200 Strong transcription Primary T regulatory cells fromperipheralblood blood
41 chr1:174974400-174985000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr1:174974400-174985600 Strong transcription Adipose Nuclei Adipose
43 chr1:174974400-174987600 Strong transcription Primary monocytes fromperipheralblood blood
44 chr1:174974400-174987800 Strong transcription Primary T helper naive cells fromperipheralblood blood
45 chr1:174974400-174987800 Strong transcription Duodenum Smooth Muscle Duodenum
46 chr1:174974400-174987800 Strong transcription Placenta Placenta
47 chr1:174974400-174987800 Strong transcription HepG2 liver
48 chr1:174974400-174988400 Strong transcription Rectal Mucosa Donor 29 rectum
49 chr1:174974600-174987000 Strong transcription HSMM muscle
50 chr1:174974600-174987400 Strong transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015