Variant report

Variant rs6690754
Chromosome Location chr1:174847445-174847446
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174843400-174847600 Active TSS Fetal Intestine Large intestine
2 chr1:174844000-174852000 Weak transcription Left Ventricle heart
3 chr1:174844000-174855200 Weak transcription Right Atrium heart
4 chr1:174844200-174852400 Weak transcription Adipose Nuclei Adipose
5 chr1:174844600-174853000 Weak transcription Primary hematopoietic stem cells blood
6 chr1:174844800-174852600 Weak transcription Primary B cells from peripheral blood blood
7 chr1:174844800-174871600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:174844800-174874400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr1:174844800-174877400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:174845000-174850200 Weak transcription Fetal Kidney kidney
11 chr1:174845000-174856200 Weak transcription Primary B cells from cord blood blood
12 chr1:174845000-174862800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:174845000-174863000 Weak transcription Primary T cells from cord blood blood
14 chr1:174845200-174849400 Weak transcription Primary monocytes fromperipheralblood blood
15 chr1:174845200-174852600 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr1:174845200-174862600 Weak transcription Liver Liver
17 chr1:174846200-174861200 Weak transcription GM12878-XiMat blood
18 chr1:174846400-174847800 Active TSS Pancreas Pancrea
19 chr1:174846600-174862800 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr1:174846800-174847600 Strong transcription H9 Cell Line embryonic stem cell
21 chr1:174846800-174847600 Transcr. at gene 5' and 3' iPS-15b Cell Line embryonic stem cell
22 chr1:174846800-174847600 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr1:174846800-174847600 Active TSS Fetal Intestine Small intestine
24 chr1:174846800-174848400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr1:174846800-174850600 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr1:174846800-174852200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:174846800-174852400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr1:174846800-174852600 Weak transcription Small Intestine intestine
29 chr1:174846800-174855200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr1:174846800-174855200 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:174846800-174861000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr1:174846800-174874000 Weak transcription Ovary ovary
33 chr1:174847000-174852400 Weak transcription HSMMtube muscle
34 chr1:174847000-174855400 Weak transcription Colonic Mucosa Colon
35 chr1:174847000-174869200 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr1:174847200-174847600 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr1:174847200-174847600 Flanking Active TSS K562 blood
38 chr1:174847200-174852600 Weak transcription Fetal Lung lung
39 chr1:174847200-174853000 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr1:174847400-174847600 Enhancers Esophagus oesophagus
41 chr1:174847400-174847600 Active TSS Pancreatic Islets Pancreatic Islet
42 chr1:174847400-174848600 Strong transcription iPS-20b Cell Line embryonic stem cell
43 chr1:174847400-174848600 Weak transcription Stomach Mucosa stomach
44 chr1:174847400-174849000 Strong transcription iPS-18 Cell Line embryonic stem cell
45 chr1:174847400-174849000 Weak transcription Fetal Stomach stomach
46 chr1:174847400-174849200 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr1:174847400-174852000 Weak transcription Duodenum Mucosa Duodenum
48 chr1:174847400-174862800 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr1:174847400-174863000 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr1:174847400-174864400 Strong transcription HUES6 Cell Line embryonic stem cell

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