Variant report

Variant	rs1894680
Chromosome Location	chr1:174922358-174922359
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EP300	chr1:174922128-174923555	GM12878	blood:	n/a	chr1:174922174-174922188 chr1:174922402-174922416 chr1:174922175-174922189 chr1:174922173-174922187 chr1:174922230-174922244
2	EBF1	chr1:174922013-174923547	GM12878	blood:	n/a	chr1:174922974-174922985
3	EP300	chr1:174922339-174923443	GM12878	blood:	n/a	chr1:174922402-174922416
4	ATF2	chr1:174922323-174923218	GM12878	blood:	n/a	n/a
5	NFATC1	chr1:174922298-174922964	GM12878	blood:	n/a	n/a
6	TBP	chr1:174922280-174923062	GM12878	blood:	n/a	n/a
7	ZNF384	chr1:174922054-174922484	GM12878	blood:	n/a	n/a
8	BHLHE40	chr1:174922181-174923459	GM12878	blood:	n/a	n/a
9	RUNX3	chr1:174921893-174923310	GM12878	blood:	n/a	n/a
10	EP300	chr1:174922293-174923185	GM12878	blood:	n/a	chr1:174922402-174922416
11	TBL1XR1	chr1:174922306-174923486	GM12878	blood:	n/a	n/a
12	MXI1	chr1:174922210-174923200	GM12878	blood:	n/a	n/a
13	NFIC	chr1:174921850-174923584	GM12878	blood:	n/a	n/a
14	CEBPB	chr1:174922307-174923541	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:174922181..174924698-chr1:174966768..174969386,2	K562	blood:

Variant related genes	Relation type
ENSG00000229531	TF binding region
ENSG00000116161	Chromatin interaction

Extended variants
information (count: 158 )
Associated
traits (count: 8 )

rSNPs within LD-proxies of this variant (count:156)

rs_ID	r²[population]
rs1012182	0.86[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1034462	0.87[CHD][hapmap];0.89[GIH][hapmap];0.88[JPT][hapmap];0.86[ASN][1000 genomes]
rs1058741	0.82[GIH][hapmap];0.88[JPT][hapmap];0.86[ASN][1000 genomes]
rs10798324	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.87[TSI][hapmap];0.89[ASN][1000 genomes]
rs10798327	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[TSI][hapmap];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10912843	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.94[TSI][hapmap];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10912853	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];0.95[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10912854	0.85[CEU][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs10912855	0.86[AFR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10912857	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11800350	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11806066	0.84[ASN][1000 genomes]
rs11809803	0.95[ASN][1000 genomes]
rs11810508	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12063093	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12078839	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.87[TSI][hapmap];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12094876	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MKK][hapmap];0.97[TSI][hapmap];0.87[YRI][hapmap];0.85[AFR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1231826	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1231827	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1231829	1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs1329281	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs1540207	0.81[GIH][hapmap]
rs1613634	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.87[TSI][hapmap];0.89[ASN][1000 genomes]
rs1618207	0.89[ASN][1000 genomes]
rs1618408	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1622802	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.87[TSI][hapmap];0.89[ASN][1000 genomes]
rs162815	0.87[ASN][1000 genomes]
rs1653630	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap];0.89[ASN][1000 genomes]
rs1653634	0.89[ASN][1000 genomes]
rs16847624	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17302033	0.95[CEU][hapmap];1.00[CHB][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.84[TSI][hapmap];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17302165	1.00[CHB][hapmap];0.86[JPT][hapmap];0.81[ASN][1000 genomes]
rs17302367	0.86[JPT][hapmap];0.86[ASN][1000 genomes]
rs1754350	0.85[ASN][1000 genomes]
rs1754352	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.94[TSI][hapmap];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1754353	0.89[ASN][1000 genomes]
rs1754354	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.91[TSI][hapmap];0.84[ASN][1000 genomes]
rs1754360	1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1793292	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.94[TSI][hapmap];0.89[ASN][1000 genomes]
rs1793294	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs1793295	0.85[ASN][1000 genomes]
rs1793298	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.94[TSI][hapmap];0.89[ASN][1000 genomes]
rs1793305	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.90[TSI][hapmap];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1793307	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1793310	1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1793313	0.85[ASN][1000 genomes]
rs1793316	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.94[TSI][hapmap];0.89[ASN][1000 genomes]
rs1793318	0.89[ASN][1000 genomes]
rs1793320	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.94[TSI][hapmap];0.84[ASN][1000 genomes]
rs1813136	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs1883139	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1894198	0.92[ASN][1000 genomes]
rs1894199	1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs1894201	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.94[TSI][hapmap];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1923818	0.89[ASN][1000 genomes]
rs193082	0.84[ASN][1000 genomes]
rs2003378	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs2156854	0.88[JPT][hapmap]
rs2157541	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2157567	0.86[ASN][1000 genomes]
rs2163628	0.85[ASN][1000 genomes]
rs2183202	0.84[CEU][hapmap];0.88[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.81[TSI][hapmap];0.89[ASN][1000 genomes]
rs2568096	0.89[ASN][1000 genomes]
rs2568098	0.89[ASN][1000 genomes]
rs2760057	0.85[ASN][1000 genomes]
rs2860725	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[TSI][hapmap]
rs2981892	0.92[ASN][1000 genomes]
rs2981893	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2981896	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2987872	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.94[TSI][hapmap];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2987873	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2987875	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2987876	0.95[ASN][1000 genomes]
rs2987880	0.90[ASN][1000 genomes]
rs3117838	0.89[ASN][1000 genomes]
rs3118982	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3118986	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3118987	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3118988	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3118990	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.84[TSI][hapmap];0.84[ASN][1000 genomes]
rs332787	0.84[ASN][1000 genomes]
rs332793	0.84[ASN][1000 genomes]
rs332797	0.84[ASN][1000 genomes]
rs332798	0.82[ASN][1000 genomes]
rs332800	0.84[CEU][hapmap];0.88[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap];0.89[ASN][1000 genomes]
rs332801	0.89[ASN][1000 genomes]
rs333432	0.89[ASN][1000 genomes]
rs333436	0.89[ASN][1000 genomes]
rs3766697	0.86[ASN][1000 genomes]
rs392307	0.89[ASN][1000 genomes]
rs4480415	0.88[JPT][hapmap]
rs459078	0.87[ASN][1000 genomes]
rs460878	0.82[ASN][1000 genomes]
rs464635	0.92[ASN][1000 genomes]
rs4651205	0.81[CEU][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs4651231	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];0.90[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.87[AFR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4651235	0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4652797	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap];0.89[ASN][1000 genomes]
rs55774740	0.86[ASN][1000 genomes]
rs55793234	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs55844798	0.89[ASN][1000 genomes]
rs57289077	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs58030712	0.90[ASN][1000 genomes]
rs60482554	0.90[ASN][1000 genomes]
rs60811893	0.89[ASN][1000 genomes]
rs6425298	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.90[MEX][hapmap];0.90[TSI][hapmap];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6425300	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6425301	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6425302	1.00[JPT][hapmap]
rs6425303	0.81[CEU][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[LWK][hapmap];0.86[MKK][hapmap];0.81[TSI][hapmap]
rs6425304	0.80[EUR][1000 genomes]
rs6425306	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6670315	1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.95[MEX][hapmap];0.84[MKK][hapmap];0.97[TSI][hapmap];0.95[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6671196	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6671272	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6671782	0.85[AFR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6675528	0.81[CEU][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];0.90[LWK][hapmap];0.91[MKK][hapmap];0.81[TSI][hapmap]
rs66836419	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6684229	0.89[AFR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6684515	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6686872	0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6687616	0.90[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6690754	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6693979	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.94[TSI][hapmap];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6696465	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.87[TSI][hapmap];0.89[ASN][1000 genomes]
rs6697561	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap]
rs6700953	0.92[ASN][1000 genomes]
rs67054007	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs67133776	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs67203477	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs67903803	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72715292	0.89[ASN][1000 genomes]
rs72715294	0.89[ASN][1000 genomes]
rs72715300	0.89[ASN][1000 genomes]
rs72717608	0.89[ASN][1000 genomes]
rs72717616	0.89[ASN][1000 genomes]
rs72717617	0.84[ASN][1000 genomes]
rs72717630	0.95[ASN][1000 genomes]
rs72717637	0.92[ASN][1000 genomes]
rs72717649	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72717650	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72717653	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72717661	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72717670	0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs74128535	0.86[ASN][1000 genomes]
rs7516410	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7521109	0.89[ASN][1000 genomes]
rs7531032	0.88[JPT][hapmap];0.86[ASN][1000 genomes]
rs7543147	0.92[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.95[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.91[YRI][hapmap];0.86[AFR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7547658	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[TSI][hapmap];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7554767	0.86[ASN][1000 genomes]
rs913686	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.91[TSI][hapmap];0.95[ASN][1000 genomes]
rs913687	1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs913688	0.89[ASN][1000 genomes]
rs9425787	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs989424	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2755184	chr1:174388343-174970343	Flanking Active TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
2	esv1794782	chr1:174900761-174925112	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

mRNA abundance (count:8)

SNP	Gene	Cis/trans	Tissue	Source
rs1894680	SLC19A2	cis	cerebellum	SCAN
rs1894680	MRPS14	Cis_1M	lymphoblastoid	RTeQTL
rs1894680	RP11-160H22.5	cis	Thyroid	GTEx
rs1894680	TNR	cis	parietal	SCAN
rs1894680	MRPS14	cis	parietal	SCAN
rs1894680	MRPS14	cis	lymphoblastoid	seeQTL
rs1894680	RABGAP1L	cis	Esophagus Muscularis	GTEx
rs1894680	RC3H1	cis	parietal	SCAN

Chromatin state (count:51 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:174874200-174938200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr1:174876800-174933600	Weak transcription	Aorta	Aorta
3	chr1:174908000-174926600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
4	chr1:174908000-174932400	Weak transcription	Primary T cells fromperipheralblood	blood
5	chr1:174908200-174924200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr1:174908600-174927400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr1:174908800-174932200	Weak transcription	Primary T cells from cord blood	blood
8	chr1:174910400-174922400	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr1:174910400-174932400	Weak transcription	HSMMtube	muscle
10	chr1:174910800-174925800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr1:174910800-174957000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr1:174912200-174925400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr1:174912400-174922400	Weak transcription	Right Atrium	heart
14	chr1:174912400-174922600	Weak transcription	Rectal Smooth Muscle	rectum
15	chr1:174912400-174923800	Weak transcription	Gastric	stomach
16	chr1:174912600-174922600	Weak transcription	Brain Angular Gyrus	brain
17	chr1:174912600-174923800	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr1:174912600-174934800	Weak transcription	Left Ventricle	heart
19	chr1:174913800-174922800	Weak transcription	Pancreas	Pancrea
20	chr1:174914800-174932800	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr1:174915000-174922400	Weak transcription	Primary B cells from cord blood	blood
22	chr1:174915400-174922400	Weak transcription	Primary neutrophils fromperipheralblood	blood
23	chr1:174915400-174922400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
24	chr1:174915600-174922400	Weak transcription	Duodenum Mucosa	Duodenum
25	chr1:174918600-174923800	Weak transcription	HUVEC	blood vessel
26	chr1:174919200-174926600	Enhancers	Fetal Intestine Large	intestine
27	chr1:174919800-174922600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
28	chr1:174920800-174926200	Weak transcription	H1 Cell Line	embryonic stem cell
29	chr1:174921000-174922400	Weak transcription	HUES48 Cell Line	embryonic stem cell
30	chr1:174921200-174922600	Weak transcription	HUES64 Cell Line	embryonic stem cell
31	chr1:174921200-174924400	Enhancers	HepG2	liver
32	chr1:174921200-174924600	Enhancers	Liver	Liver
33	chr1:174921200-174925200	Enhancers	Fetal Intestine Small	intestine
34	chr1:174921400-174925000	Enhancers	Placenta	Placenta
35	chr1:174921600-174922400	Enhancers	GM12878-XiMat	blood
36	chr1:174921600-174922800	Enhancers	Stomach Mucosa	stomach
37	chr1:174921800-174922400	Enhancers	Pancreatic Islets	Pancreatic Islet
38	chr1:174921800-174922600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
39	chr1:174921800-174924600	Enhancers	Primary B cells from peripheral blood	blood
40	chr1:174921800-174925000	Enhancers	Sigmoid Colon	Sigmoid Colon
41	chr1:174922000-174924600	Enhancers	K562	blood
42	chr1:174922000-174925000	Enhancers	Primary monocytes fromperipheralblood	blood
43	chr1:174922200-174922400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr1:174922200-174922400	Active TSS	Rectal Mucosa Donor 29	rectum
45	chr1:174922200-174922400	Enhancers	Rectal Mucosa Donor 31	rectum
46	chr1:174922200-174922600	Enhancers	Monocytes-CD14+_RO01746	blood
47	chr1:174922200-174922800	Enhancers	iPS-15b Cell Line	embryonic stem cell
48	chr1:174922200-174923000	Enhancers	ES-I3 Cell Line	embryonic stem cell
49	chr1:174922200-174923800	Weak transcription	Small Intestine	intestine
50	chr1:174922200-174924000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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