The 2.0 version of rSNPBase

Variant report

Variant rs7645169
Chromosome Location chr3:52884402-52884403
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52854800-52888400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr3:52866000-52884800 Weak transcription HMEC breast
3 chr3:52866200-52885200 Weak transcription NHEK skin
4 chr3:52870000-52901000 Weak transcription Fetal Brain Male brain
5 chr3:52873400-52891600 Strong transcription Primary T cells from cord blood blood
6 chr3:52873400-52892000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
7 chr3:52873600-52889000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr3:52873800-52889000 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr3:52873800-52891400 Strong transcription Primary T regulatory cells fromperipheralblood blood
10 chr3:52875800-52885800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr3:52876000-52885800 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr3:52877000-52885000 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr3:52877000-52885600 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr3:52879600-52889800 Weak transcription K562 blood
15 chr3:52879800-52888200 Weak transcription Stomach Mucosa stomach
16 chr3:52879800-52894800 Weak transcription HSMM muscle
17 chr3:52880200-52885000 Weak transcription HepG2 liver
18 chr3:52880200-52887200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr3:52880200-52890200 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr3:52880400-52890000 Strong transcription Primary T cells fromperipheralblood blood
21 chr3:52880600-52885200 Weak transcription Colon Smooth Muscle Colon
22 chr3:52880600-52891000 Weak transcription Fetal Heart heart
23 chr3:52880800-52885800 Strong transcription Fetal Adrenal Gland Adrenal Gland
24 chr3:52880800-52886000 Strong transcription Lung lung
25 chr3:52880800-52889800 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr3:52880800-52890000 Strong transcription Primary T helper cells PMA-I stimulated --
27 chr3:52881000-52885200 Weak transcription Primary hematopoietic stem cells blood
28 chr3:52881000-52886000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr3:52881000-52886200 Strong transcription Brain Germinal Matrix brain
30 chr3:52881000-52886600 Strong transcription Brain Substantia Nigra brain
31 chr3:52881000-52889200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
32 chr3:52881200-52886000 Genic enhancers Fetal Thymus thymus
33 chr3:52881200-52886600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr3:52881200-52886600 Strong transcription Brain Hippocampus Middle brain
35 chr3:52881200-52886600 Strong transcription Duodenum Smooth Muscle Duodenum
36 chr3:52881200-52886600 Strong transcription Fetal Intestine Large intestine
37 chr3:52881200-52886600 Strong transcription Fetal Lung lung
38 chr3:52881200-52886600 Strong transcription Pancreas Pancrea
39 chr3:52881200-52886800 Strong transcription Ovary ovary
40 chr3:52881200-52887000 Strong transcription Fetal Brain Female brain
41 chr3:52881200-52889000 Strong transcription Breast Myoepithelial Primary Cells Breast
42 chr3:52881200-52889000 Strong transcription Primary neutrophils fromperipheralblood blood
43 chr3:52881200-52889200 Strong transcription Liver Liver
44 chr3:52881200-52889200 Strong transcription Brain Inferior Temporal Lobe brain
45 chr3:52881200-52890000 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr3:52881200-52890200 Strong transcription Primary monocytes fromperipheralblood blood
47 chr3:52881200-52890200 Strong transcription Adipose Nuclei Adipose
48 chr3:52881400-52885400 Strong transcription Brain Angular Gyrus brain
49 chr3:52881400-52886600 Strong transcription Primary T helper naive cells fromperipheralblood blood
50 chr3:52881400-52886600 Strong transcription Fetal Intestine Small intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015