Variant report

Variant rs4687666
Chromosome Location chr3:52875575-52875576
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52854800-52888400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr3:52862000-52882600 Weak transcription Placenta Amnion Placenta Amnion
3 chr3:52864400-52875800 Strong transcription Primary neutrophils fromperipheralblood blood
4 chr3:52865800-52878600 Weak transcription Small Intestine intestine
5 chr3:52866000-52884800 Weak transcription HMEC breast
6 chr3:52866200-52885200 Weak transcription NHEK skin
7 chr3:52866600-52879200 Weak transcription Osteobl bone
8 chr3:52866800-52876400 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr3:52866800-52878200 Strong transcription Fetal Brain Female brain
10 chr3:52866800-52879600 Genic enhancers Fetal Thymus thymus
11 chr3:52867000-52876400 Strong transcription Primary monocytes fromperipheralblood blood
12 chr3:52867000-52881600 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr3:52867000-52881800 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr3:52868000-52878800 Strong transcription Primary hematopoietic stem cells short term culture blood
15 chr3:52868000-52883200 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr3:52868400-52877800 Strong transcription Brain Germinal Matrix brain
17 chr3:52868800-52876800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr3:52869000-52878800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr3:52869000-52879400 Strong transcription Fetal Intestine Small intestine
20 chr3:52869000-52881800 Weak transcription Fetal Kidney kidney
21 chr3:52869400-52875600 Weak transcription Colonic Mucosa Colon
22 chr3:52869600-52878600 Weak transcription NHDF-Ad bronchial
23 chr3:52869600-52879600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr3:52869600-52881800 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr3:52869800-52875600 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr3:52869800-52876600 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr3:52869800-52882000 Weak transcription H1 Cell Line embryonic stem cell
28 chr3:52869800-52884000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr3:52870000-52878800 Genic enhancers Fetal Muscle Leg muscle
30 chr3:52870000-52901000 Weak transcription Fetal Brain Male brain
31 chr3:52870200-52875600 Strong transcription Stomach Smooth Muscle stomach
32 chr3:52870200-52876600 Strong transcription Fetal Stomach stomach
33 chr3:52870400-52875800 Enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr3:52870400-52876400 Strong transcription Duodenum Smooth Muscle Duodenum
35 chr3:52870400-52877400 Strong transcription Lung lung
36 chr3:52870600-52877000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr3:52870600-52877400 Strong transcription Adipose Nuclei Adipose
38 chr3:52870600-52879400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr3:52871200-52879800 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr3:52871600-52876600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr3:52871600-52877600 Strong transcription Brain Hippocampus Middle brain
42 chr3:52872200-52875600 Strong transcription Brain Cingulate Gyrus brain
43 chr3:52872200-52878800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr3:52872400-52876800 Strong transcription Aorta Aorta
45 chr3:52872400-52877000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr3:52872400-52877000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr3:52872600-52876000 Strong transcription Colon Smooth Muscle Colon
48 chr3:52872600-52876600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr3:52872600-52876600 Strong transcription Brain Substantia Nigra brain
50 chr3:52872600-52877000 Strong transcription Ovary ovary

Quick Search:


  
Input of quick search could be:

what's new

Quick links