The 2.0 version of rSNPBase

Variant report

Variant rs59094265
Chromosome Location chr3:52907947-52907948
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52886600-52908600 Weak transcription Primary T helper naive cells fromperipheralblood blood
2 chr3:52886600-52911000 Weak transcription Primary B cells from cord blood blood
3 chr3:52886600-52920000 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr3:52886600-52930200 Weak transcription Colonic Mucosa Colon
5 chr3:52887000-52919400 Weak transcription Fetal Brain Female brain
6 chr3:52887000-52926400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr3:52887800-52923200 Weak transcription Brain Germinal Matrix brain
8 chr3:52889800-52909400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr3:52890000-52908600 Weak transcription Primary T cells fromperipheralblood blood
10 chr3:52890000-52908800 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr3:52891600-52909400 Weak transcription Ovary ovary
12 chr3:52891600-52919600 Weak transcription Left Ventricle heart
13 chr3:52892000-52926400 Weak transcription Rectal Smooth Muscle rectum
14 chr3:52894600-52911200 Weak transcription Stomach Smooth Muscle stomach
15 chr3:52895000-52909000 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr3:52895400-52919400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr3:52895800-52923800 Weak transcription Brain Cingulate Gyrus brain
18 chr3:52895800-52925200 Weak transcription Esophagus oesophagus
19 chr3:52896200-52909800 Weak transcription Gastric stomach
20 chr3:52898800-52909600 Weak transcription H9 Cell Line embryonic stem cell
21 chr3:52900000-52912800 Weak transcription Primary B cells from peripheral blood blood
22 chr3:52900600-52909000 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr3:52900600-52912200 Weak transcription Fetal Muscle Leg muscle
24 chr3:52900800-52909400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr3:52900800-52912400 Weak transcription Fetal Muscle Trunk muscle
26 chr3:52900800-52912800 Weak transcription Fetal Intestine Small intestine
27 chr3:52900800-52913000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr3:52901400-52908200 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr3:52901400-52910200 Weak transcription Spleen Spleen
30 chr3:52901800-52912800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr3:52902000-52909400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr3:52902200-52908400 Weak transcription GM12878-XiMat blood
33 chr3:52902200-52925200 Weak transcription Placenta Placenta
34 chr3:52902400-52909400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr3:52902600-52908000 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr3:52903400-52909200 Enhancers Primary neutrophils fromperipheralblood blood
37 chr3:52904000-52918400 Weak transcription Fetal Intestine Large intestine
38 chr3:52904200-52911200 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr3:52904400-52912800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr3:52904600-52919400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr3:52904800-52909000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr3:52904800-52909400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr3:52904800-52912600 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr3:52904800-52912800 Weak transcription Primary hematopoietic stem cells blood
45 chr3:52905000-52909800 Weak transcription Psoas Muscle Psoas
46 chr3:52905000-52919800 Weak transcription Right Ventricle heart
47 chr3:52905600-52910000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr3:52905600-52911200 Weak transcription Fetal Stomach stomach
49 chr3:52906000-52909600 Enhancers K562 blood
50 chr3:52906000-52924400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015