The 2.0 version of rSNPBase

Variant report

Variant rs61274383
Chromosome Location chr3:52907194-52907195
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52884000-52907400 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr3:52886200-52907800 Weak transcription NHLF lung
3 chr3:52886600-52907600 Weak transcription Brain Hippocampus Middle brain
4 chr3:52886600-52907800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr3:52886600-52908600 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr3:52886600-52911000 Weak transcription Primary B cells from cord blood blood
7 chr3:52886600-52920000 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr3:52886600-52930200 Weak transcription Colonic Mucosa Colon
9 chr3:52886800-52907600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr3:52887000-52919400 Weak transcription Fetal Brain Female brain
11 chr3:52887000-52926400 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr3:52887800-52923200 Weak transcription Brain Germinal Matrix brain
13 chr3:52889800-52909400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr3:52890000-52907800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr3:52890000-52908600 Weak transcription Primary T cells fromperipheralblood blood
16 chr3:52890000-52908800 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr3:52891600-52909400 Weak transcription Ovary ovary
18 chr3:52891600-52919600 Weak transcription Left Ventricle heart
19 chr3:52892000-52926400 Weak transcription Rectal Smooth Muscle rectum
20 chr3:52892600-52907800 Weak transcription Brain Inferior Temporal Lobe brain
21 chr3:52894600-52911200 Weak transcription Stomach Smooth Muscle stomach
22 chr3:52894800-52907600 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr3:52895000-52909000 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr3:52895400-52907400 Weak transcription Brain Angular Gyrus brain
25 chr3:52895400-52919400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr3:52895800-52923800 Weak transcription Brain Cingulate Gyrus brain
27 chr3:52895800-52925200 Weak transcription Esophagus oesophagus
28 chr3:52896200-52909800 Weak transcription Gastric stomach
29 chr3:52898400-52907400 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr3:52898800-52909600 Weak transcription H9 Cell Line embryonic stem cell
31 chr3:52900000-52912800 Weak transcription Primary B cells from peripheral blood blood
32 chr3:52900600-52907200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr3:52900600-52909000 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr3:52900600-52912200 Weak transcription Fetal Muscle Leg muscle
35 chr3:52900800-52907600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr3:52900800-52907600 Weak transcription Aorta Aorta
37 chr3:52900800-52909400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr3:52900800-52912400 Weak transcription Fetal Muscle Trunk muscle
39 chr3:52900800-52912800 Weak transcription Fetal Intestine Small intestine
40 chr3:52900800-52913000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr3:52901400-52908200 Weak transcription Monocytes-CD14+_RO01746 blood
42 chr3:52901400-52910200 Weak transcription Spleen Spleen
43 chr3:52901800-52912800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr3:52902000-52907600 Weak transcription Primary monocytes fromperipheralblood blood
45 chr3:52902000-52907600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr3:52902000-52909400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr3:52902200-52908400 Weak transcription GM12878-XiMat blood
48 chr3:52902200-52925200 Weak transcription Placenta Placenta
49 chr3:52902400-52909400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr3:52902600-52908000 Weak transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015