Variant report

Variant rs13066997
Chromosome Location chr3:52888016-52888017
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52854800-52888400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr3:52870000-52901000 Weak transcription Fetal Brain Male brain
3 chr3:52873400-52891600 Strong transcription Primary T cells from cord blood blood
4 chr3:52873400-52892000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
5 chr3:52873600-52889000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr3:52873800-52889000 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr3:52873800-52891400 Strong transcription Primary T regulatory cells fromperipheralblood blood
8 chr3:52879600-52889800 Weak transcription K562 blood
9 chr3:52879800-52888200 Weak transcription Stomach Mucosa stomach
10 chr3:52879800-52894800 Weak transcription HSMM muscle
11 chr3:52880200-52890200 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr3:52880400-52890000 Strong transcription Primary T cells fromperipheralblood blood
13 chr3:52880600-52891000 Weak transcription Fetal Heart heart
14 chr3:52880800-52889800 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr3:52880800-52890000 Strong transcription Primary T helper cells PMA-I stimulated --
16 chr3:52881000-52889200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
17 chr3:52881200-52889000 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr3:52881200-52889000 Strong transcription Primary neutrophils fromperipheralblood blood
19 chr3:52881200-52889200 Strong transcription Liver Liver
20 chr3:52881200-52889200 Strong transcription Brain Inferior Temporal Lobe brain
21 chr3:52881200-52890000 Strong transcription Primary T helper cells fromperipheralblood blood
22 chr3:52881200-52890200 Strong transcription Primary monocytes fromperipheralblood blood
23 chr3:52881200-52890200 Strong transcription Adipose Nuclei Adipose
24 chr3:52881400-52888600 Strong transcription Brain Anterior Caudate brain
25 chr3:52881800-52890000 Strong transcription Thymus Thymus
26 chr3:52882200-52888800 Strong transcription Fetal Stomach stomach
27 chr3:52883200-52889800 Weak transcription Osteobl bone
28 chr3:52883400-52889200 Strong transcription Fetal Muscle Leg muscle
29 chr3:52883400-52894200 Weak transcription HSMMtube muscle
30 chr3:52883400-52894600 Weak transcription Hela-S3 cervix
31 chr3:52883600-52888400 Strong transcription Stomach Smooth Muscle stomach
32 chr3:52883600-52889200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr3:52883800-52894400 Weak transcription Psoas Muscle Psoas
34 chr3:52884000-52898200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr3:52884000-52907400 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr3:52884200-52893000 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr3:52884400-52893000 Weak transcription Small Intestine intestine
38 chr3:52884600-52888800 Strong transcription Aorta Aorta
39 chr3:52885000-52888400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr3:52885400-52890000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
41 chr3:52885400-52899600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr3:52885600-52890000 Strong transcription Skeletal Muscle Male skeletal muscle
43 chr3:52885800-52888400 Genic enhancers Fetal Adrenal Gland Adrenal Gland
44 chr3:52885800-52888800 Strong transcription Primary T helper naive cells from peripheral blood blood
45 chr3:52886000-52891000 Strong transcription Fetal Thymus thymus
46 chr3:52886200-52907800 Weak transcription NHLF lung
47 chr3:52886400-52888800 Weak transcription Primary hematopoietic stem cells blood
48 chr3:52886400-52889400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr3:52886400-52894200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr3:52886600-52888200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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