Variant report
| Variant | rs2336161 |
|---|---|
| Chromosome Location | chr3:52951155-52951156 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:52931800-52965400 | Weak transcription | Spleen | Spleen |
| 2 | chr3:52932000-52953400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 3 | chr3:52932000-52954000 | Weak transcription | Small Intestine | intestine |
| 4 | chr3:52932000-52964000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 5 | chr3:52932000-52970000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 6 | chr3:52932000-52978000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 7 | chr3:52932200-52951400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 8 | chr3:52932200-52952800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 9 | chr3:52932200-52953600 | Weak transcription | Right Ventricle | heart |
| 10 | chr3:52932200-52953800 | Weak transcription | Ovary | ovary |
| 11 | chr3:52932200-52961400 | Weak transcription | HSMMtube | muscle |
| 12 | chr3:52932200-52961800 | Weak transcription | A549 | lung |
| 13 | chr3:52932200-52963000 | Weak transcription | Stomach Mucosa | stomach |
| 14 | chr3:52932200-52966400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 15 | chr3:52932200-52967800 | Weak transcription | HSMM | muscle |
| 16 | chr3:52932200-52968600 | Weak transcription | Osteobl | bone |
| 17 | chr3:52932200-52968800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 18 | chr3:52932200-52968800 | Weak transcription | Fetal Brain Male | brain |
| 19 | chr3:52932400-52953000 | Weak transcription | Brain Angular Gyrus | brain |
| 20 | chr3:52932400-52953400 | Weak transcription | Fetal Kidney | kidney |
| 21 | chr3:52932400-52968600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 22 | chr3:52932400-52968600 | Weak transcription | NHDF-Ad | bronchial |
| 23 | chr3:52932400-52968800 | Weak transcription | NHEK | skin |
| 24 | chr3:52935600-52968600 | Strong transcription | Dnd41 | blood |
| 25 | chr3:52937200-52959800 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 26 | chr3:52938000-52959000 | Strong transcription | Primary B cells from peripheral blood | blood |
| 27 | chr3:52939400-52953000 | Weak transcription | Aorta | Aorta |
| 28 | chr3:52939600-52953400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 29 | chr3:52939600-52961200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 30 | chr3:52940200-52953400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 31 | chr3:52941400-52952000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 32 | chr3:52941800-52961600 | Weak transcription | Colonic Mucosa | Colon |
| 33 | chr3:52941800-52980200 | Weak transcription | Psoas Muscle | Psoas |
| 34 | chr3:52943200-52958800 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 35 | chr3:52943200-52958800 | Strong transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 36 | chr3:52943600-52957000 | Strong transcription | Placenta | Placenta |
| 37 | chr3:52943600-52962400 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 38 | chr3:52943600-52964000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 39 | chr3:52943800-52956200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 40 | chr3:52943800-52957600 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 41 | chr3:52944400-52956400 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 42 | chr3:52944600-52951400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 43 | chr3:52945200-52960000 | Weak transcription | Gastric | stomach |
| 44 | chr3:52946800-52952400 | Strong transcription | Primary B cells from cord blood | blood |
| 45 | chr3:52947200-52952800 | Weak transcription | Pancreas | Pancrea |
| 46 | chr3:52947200-52953000 | Weak transcription | Lung | lung |
| 47 | chr3:52947200-52953600 | Weak transcription | Esophagus | oesophagus |
| 48 | chr3:52947400-52951200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 49 | chr3:52947400-52951400 | Weak transcription | Hela-S3 | cervix |
| 50 | chr3:52947400-52953400 | Weak transcription | Brain Cingulate Gyrus | brain |
