The 2.0 version of rSNPBase

Variant report

Variant rs2710327
Chromosome Location chr3:52995766-52995767
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52954000-53012200 Weak transcription Esophagus oesophagus
2 chr3:52954200-53012200 Weak transcription Pancreas Pancrea
3 chr3:52962400-52998200 Weak transcription Lung lung
4 chr3:52962400-53001600 Weak transcription Brain Angular Gyrus brain
5 chr3:52962400-53007000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr3:52962400-53012400 Weak transcription Adipose Nuclei Adipose
7 chr3:52964600-53012200 Weak transcription Fetal Muscle Leg muscle
8 chr3:52965000-52998400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr3:52965000-53039800 Weak transcription Left Ventricle heart
10 chr3:52965600-53008200 Weak transcription GM12878-XiMat blood
11 chr3:52966400-53001600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr3:52969000-53008000 Weak transcription Colon Smooth Muscle Colon
13 chr3:52969200-52996200 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr3:52969200-52997400 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr3:52975000-53008000 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr3:52975200-53000600 Weak transcription Hela-S3 cervix
17 chr3:52977600-53017000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr3:52980400-52996600 Weak transcription Psoas Muscle Psoas
19 chr3:52984000-52998800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr3:52984400-53006000 Weak transcription Fetal Heart heart
21 chr3:52984600-53003000 Weak transcription Brain Inferior Temporal Lobe brain
22 chr3:52986400-53012200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr3:52986800-52999000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr3:52986800-53001600 Weak transcription Liver Liver
25 chr3:52986800-53006200 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr3:52987000-53002000 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr3:52987000-53003200 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr3:52987200-53017400 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr3:52987400-53002800 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr3:52987400-53004600 Weak transcription Stomach Smooth Muscle stomach
31 chr3:52987600-52998000 Weak transcription Fetal Intestine Large intestine
32 chr3:52987600-53003600 Weak transcription Primary T cells fromperipheralblood blood
33 chr3:52987600-53005800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr3:52987600-53009400 Weak transcription Placenta Placenta
35 chr3:52987600-53014200 Weak transcription Fetal Thymus thymus
36 chr3:52987600-53014200 Weak transcription Thymus Thymus
37 chr3:52987800-52995800 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr3:52987800-53004600 Weak transcription Fetal Muscle Trunk muscle
39 chr3:52987800-53017000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr3:52987800-53017000 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr3:52988000-52997200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr3:52988000-52998000 Weak transcription Fetal Intestine Small intestine
43 chr3:52988000-53003000 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr3:52988000-53004800 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr3:52988000-53014200 Weak transcription Primary T cells from cord blood blood
46 chr3:52988200-52998000 Weak transcription Fetal Stomach stomach
47 chr3:52990400-52998400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr3:52992000-53003400 Weak transcription Primary B cells from peripheral blood blood
49 chr3:52992000-53015800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr3:52992200-53005600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015