Variant report
| Variant | rs2710315 |
|---|---|
| Chromosome Location | chr3:52968801-52968802 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:52932000-52970000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 2 | chr3:52932000-52978000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 3 | chr3:52941800-52980200 | Weak transcription | Psoas Muscle | Psoas |
| 4 | chr3:52954000-53012200 | Weak transcription | Esophagus | oesophagus |
| 5 | chr3:52954200-53012200 | Weak transcription | Pancreas | Pancrea |
| 6 | chr3:52954800-52976800 | Weak transcription | Brain Germinal Matrix | brain |
| 7 | chr3:52955200-52986400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 8 | chr3:52956000-52973800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 9 | chr3:52956400-52986400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 10 | chr3:52957200-52974800 | Weak transcription | Primary T cells from cord blood | blood |
| 11 | chr3:52958200-52985800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 12 | chr3:52960200-52979600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 13 | chr3:52961600-52987000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 14 | chr3:52962400-52969800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 15 | chr3:52962400-52969800 | Weak transcription | HMEC | breast |
| 16 | chr3:52962400-52970000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 17 | chr3:52962400-52975800 | Weak transcription | HepG2 | liver |
| 18 | chr3:52962400-52986600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 19 | chr3:52962400-52998200 | Weak transcription | Lung | lung |
| 20 | chr3:52962400-53001600 | Weak transcription | Brain Angular Gyrus | brain |
| 21 | chr3:52962400-53007000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 22 | chr3:52962400-53012400 | Weak transcription | Adipose Nuclei | Adipose |
| 23 | chr3:52962600-52979400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 24 | chr3:52963000-52974800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 25 | chr3:52963000-52976400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 26 | chr3:52964200-52975600 | Weak transcription | Fetal Intestine Small | intestine |
| 27 | chr3:52964200-52984400 | Weak transcription | Fetal Stomach | stomach |
| 28 | chr3:52964200-52995400 | Weak transcription | Gastric | stomach |
| 29 | chr3:52964400-52976000 | Weak transcription | Fetal Intestine Large | intestine |
| 30 | chr3:52964400-52984200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 31 | chr3:52964400-52988200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 32 | chr3:52964600-53012200 | Weak transcription | Fetal Muscle Leg | muscle |
| 33 | chr3:52965000-52973600 | Weak transcription | Hela-S3 | cervix |
| 34 | chr3:52965000-52976600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 35 | chr3:52965000-52986000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 36 | chr3:52965000-52986800 | Weak transcription | Thymus | Thymus |
| 37 | chr3:52965000-52998400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 38 | chr3:52965000-53039800 | Weak transcription | Left Ventricle | heart |
| 39 | chr3:52965200-52976800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 40 | chr3:52965200-52986600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 41 | chr3:52965400-52969600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 42 | chr3:52965400-52973600 | Weak transcription | Primary B cells from cord blood | blood |
| 43 | chr3:52965600-53008200 | Weak transcription | GM12878-XiMat | blood |
| 44 | chr3:52966200-52972000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 45 | chr3:52966200-52972800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 46 | chr3:52966200-52976600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 47 | chr3:52966200-52985800 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 48 | chr3:52966400-52973000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 49 | chr3:52966400-52976800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 50 | chr3:52966400-52986000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
