Variant report

Variant rs2535636
Chromosome Location chr3:52859182-52859183
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52846400-52860800 Weak transcription Esophagus oesophagus
2 chr3:52847200-52861200 Genic enhancers Liver Liver
3 chr3:52847600-52865000 Weak transcription Psoas Muscle Psoas
4 chr3:52848400-52865800 Weak transcription Ovary ovary
5 chr3:52850200-52868400 Weak transcription Colonic Mucosa Colon
6 chr3:52850600-52864200 Strong transcription Stomach Smooth Muscle stomach
7 chr3:52850800-52865400 Strong transcription Fetal Stomach stomach
8 chr3:52851600-52863400 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr3:52852200-52869200 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr3:52852800-52869200 Weak transcription Primary B cells from cord blood blood
11 chr3:52853000-52868000 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr3:52853200-52859400 Strong transcription Thymus Thymus
13 chr3:52853400-52861200 Strong transcription Fetal Muscle Leg muscle
14 chr3:52854000-52861200 Strong transcription Pancreas Pancrea
15 chr3:52854200-52874200 Weak transcription H9 Cell Line embryonic stem cell
16 chr3:52854400-52861600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr3:52854800-52869200 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr3:52854800-52888400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr3:52855000-52861600 Strong transcription Skeletal Muscle Female skeletal muscle
20 chr3:52855200-52860800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr3:52855200-52865400 Weak transcription Brain Substantia Nigra brain
22 chr3:52855600-52862000 Strong transcription Skeletal Muscle Male skeletal muscle
23 chr3:52855600-52865400 Weak transcription Colon Smooth Muscle Colon
24 chr3:52856000-52865400 Weak transcription Rectal Smooth Muscle rectum
25 chr3:52856000-52875000 Weak transcription Fetal Intestine Large intestine
26 chr3:52856200-52865600 Weak transcription Left Ventricle heart
27 chr3:52856400-52868200 Weak transcription Fetal Lung lung
28 chr3:52856600-52859200 Strong transcription Brain Anterior Caudate brain
29 chr3:52856600-52860400 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr3:52856600-52861000 Strong transcription Fetal Muscle Trunk muscle
31 chr3:52856600-52861200 Strong transcription Primary T cells from cord blood blood
32 chr3:52856600-52864400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr3:52856800-52859400 Strong transcription Fetal Intestine Small intestine
34 chr3:52856800-52863400 Strong transcription Fetal Thymus thymus
35 chr3:52857000-52861000 Weak transcription HepG2 liver
36 chr3:52857000-52868600 Weak transcription Primary B cells from peripheral blood blood
37 chr3:52857800-52865400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr3:52858000-52867800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr3:52858000-52868400 Weak transcription Brain Germinal Matrix brain
40 chr3:52858200-52865400 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr3:52858400-52861400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr3:52858400-52865400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr3:52858400-52865400 Weak transcription Brain Angular Gyrus brain
44 chr3:52858400-52866800 Weak transcription Fetal Brain Female brain
45 chr3:52858400-52867200 Weak transcription Primary T cells fromperipheralblood blood
46 chr3:52858400-52867600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr3:52858600-52861000 Weak transcription Spleen Spleen
48 chr3:52858600-52861800 Weak transcription Gastric stomach
49 chr3:52858600-52864600 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr3:52858600-52864800 Weak transcription Right Ventricle heart

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