Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10003998	0.84[EUR][1000 genomes]
rs10014915	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12641678	0.81[EUR][1000 genomes]
rs12644630	0.99[EUR][1000 genomes]
rs17254079	0.81[EUR][1000 genomes]
rs17254611	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17254681	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2653844	0.81[EUR][1000 genomes]
rs28380538	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs28483480	0.88[EUR][1000 genomes]
rs28485277	0.85[EUR][1000 genomes]
rs28524136	0.81[EUR][1000 genomes]
rs28582871	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28671519	0.87[EUR][1000 genomes]
rs28705797	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs28800549	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs28890012	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4547777	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55936404	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs62341884	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62341886	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62341919	0.82[EUR][1000 genomes]
rs62341920	0.80[EUR][1000 genomes]
rs7663630	0.88[EUR][1000 genomes]
rs7693329	0.88[EUR][1000 genomes]
rs9997573	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948856	chr4:173388217-173967546	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv949126	chr4:173466221-174051451	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:173896200-173899600	Weak transcription	Gastric	stomach
2	chr4:173896600-173897400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr4:173897000-173897200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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