Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10520249	0.83[CEU][hapmap]
rs10520251	0.94[CEU][hapmap]
rs12644630	0.87[EUR][1000 genomes]
rs17254079	0.83[CEU][hapmap]
rs17254611	0.94[CEU][hapmap];0.88[EUR][1000 genomes]
rs17254681	0.94[CEU][hapmap];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2610188	0.82[CEU][hapmap]
rs2610215	0.87[ASN][1000 genomes]
rs2653831	0.83[CEU][hapmap]
rs2653844	0.83[CEU][hapmap]
rs28380538	0.87[EUR][1000 genomes]
rs28483480	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28485277	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28582871	0.88[EUR][1000 genomes]
rs28671519	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28705797	0.87[EUR][1000 genomes]
rs28800549	0.86[EUR][1000 genomes]
rs4547777	0.94[CEU][hapmap];0.88[EUR][1000 genomes]
rs4574383	0.84[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.83[YRI][hapmap];0.80[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs55936404	0.86[EUR][1000 genomes]
rs62341884	0.88[EUR][1000 genomes]
rs62341886	0.88[EUR][1000 genomes]
rs7663630	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7682619	0.88[EUR][1000 genomes]
rs9997573	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948856	chr4:173388217-173967546	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv949126	chr4:173466221-174051451	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:173896200-173899600	Weak transcription	Gastric	stomach
2	chr4:173897200-173901800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr4:173897400-173897800	Weak transcription	A549	lung
4	chr4:173897400-173898000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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