Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1124956	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12529594	0.82[EUR][1000 genomes]
rs12661628	0.85[ASN][1000 genomes]
rs1322451	0.94[ASN][1000 genomes]
rs1535476	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4895636	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4896707	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4896708	0.82[EUR][1000 genomes]
rs6570613	0.88[ASN][1000 genomes]
rs6570614	0.88[ASN][1000 genomes]
rs6570618	0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7738503	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7765978	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7766690	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7767952	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7770125	0.80[EUR][1000 genomes]
rs9376812	0.85[ASN][1000 genomes]
rs9376814	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9386062	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9390159	0.92[ASN][1000 genomes]
rs9399474	0.94[ASN][1000 genomes]
rs9403558	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830831	chr6:144501371-144649509	Bivalent/Poised TSS Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:144564800-144566200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr6:144566000-144566400	Enhancers	Right Ventricle	heart
3	chr6:144566000-144566600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr6:144566000-144567000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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