Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1124956	0.98[ASN][1000 genomes]
rs12529594	0.94[EUR][1000 genomes]
rs12661628	0.86[ASN][1000 genomes]
rs1322450	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1322451	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1535476	0.93[ASN][1000 genomes]
rs1547622	0.87[EUR][1000 genomes]
rs1985845	0.87[EUR][1000 genomes]
rs4895636	0.91[ASN][1000 genomes]
rs4896707	0.91[ASN][1000 genomes]
rs6570613	0.89[ASN][1000 genomes]
rs6570614	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6570618	0.85[ASN][1000 genomes]
rs7738503	0.90[ASN][1000 genomes]
rs7741762	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7750035	0.94[ASN][1000 genomes]
rs7763017	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7766690	0.93[ASN][1000 genomes]
rs7767952	0.98[ASN][1000 genomes]
rs9376812	0.86[ASN][1000 genomes]
rs9376814	0.96[ASN][1000 genomes]
rs9386062	0.91[ASN][1000 genomes]
rs9390159	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9403556	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9403557	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9403558	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830831	chr6:144501371-144649509	Bivalent/Poised TSS Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:144561200-144561800	Enhancers	HUVEC	blood vessel
2	chr6:144561400-144561800	Enhancers	H1 Cell Line	embryonic stem cell
3	chr6:144561400-144561800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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